Opened 4 years ago
Closed 3 years ago
#1448 closed Bug (fixed)
Error during installation using Conda
Reported by: | Sebastian Urrutia Quiroga | Owned by: | |
---|---|---|---|
Priority: | critical | Milestone: | |
Component: | Delphes code | Version: | Delphes 3 |
Keywords: | Cc: |
Description
Hi,
I have installed ROOT using Conda (https://anaconda.org/conda-forge/root) and I'm getting an error when I try to compile Delphes:
>> Generating tmp/classes/ClassesDict.cc In file included from input_line_14:1: In file included from /Users/surrutiaquir/miniconda3/include/TStreamerInfo.h:21: In file included from /Users/surrutiaquir/miniconda3/include/TVirtualCollectionProxy.h:26: In file included from /Users/surrutiaquir/miniconda3/include/TClassRef.h:24: In file included from /Users/surrutiaquir/miniconda3/include/TClass.h:31: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/unordered_set:367: /Users/surrutiaquir/Documents/Programs/MG5_aMC_v2_7_3_py3/Delphes/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:2: In file included from /Users/surrutiaquir/miniconda3/include/TFile.h:33: In file included from /Users/surrutiaquir/miniconda3/include/ROOT/TRWSpinLock.hxx:19: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/condition_variable:110: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/__mutex_base:14: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/chrono:801: /Users/surrutiaquir/Documents/Programs/MG5_aMC_v2_7_3_py3/Delphes/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:2: In file included from /Users/surrutiaquir/miniconda3/include/TFile.h:34: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/mutex:197: /Users/surrutiaquir/Documents/Programs/MG5_aMC_v2_7_3_py3/Delphes/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/miniconda3/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/sstream:173: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/ostream:140: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/locale:189: /Users/surrutiaquir/Documents/Programs/MG5_aMC_v2_7_3_py3/Delphes/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/miniconda3/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/sstream:173: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/ostream:143: /Users/surrutiaquir/Documents/Programs/MG5_aMC_v2_7_3_py3/Delphes/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/miniconda3/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/sstream:174: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/istream:162: /Users/surrutiaquir/Documents/Programs/MG5_aMC_v2_7_3_py3/Delphes/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/miniconda3/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/miniconda3/bin/../include/c++/v1/complex:247: /Users/surrutiaquir/Documents/Programs/MG5_aMC_v2_7_3_py3/Delphes/version:1:1: error: expected unqualified-id 3.4.2 ^ make: *** [tmp/classes/ClassesDict.cc] Error 1
Do you have any idea about what could be causing this?
OS: MacOS Catalina
ROOT: 6.18/04
Delphes: 3.4.2
Commands:
cd Delphes-3.4.2 make
Thank you in advance,
Sebastian
Change History (10)
comment:1 by , 4 years ago
comment:2 by , 4 years ago
Thank you for spotting this problem.
I'd prefer to replace -I. -Iexternal -Iexternal/tcl
with -iquote . -iquote external -iquote external/tcl
in Makefile and in doc/genMakefile.tcl.
Could you please check if this workaround works on your system?
comment:3 by , 4 years ago
Thank you both for your suggestions. It seems neither of them is working for me.
- If I just rename the
VERSION
file, I get this error message:>> Generating tmp/classes/ClassesDict.cc In file included from input_line_14:1: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TStreamerInfo.h:21: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TVirtualCollectionProxy.h:26: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TClassRef.h:24: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TClass.h:38: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/unordered_set:367: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:2: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TFile.h:37: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/ROOT/TRWSpinLock.hxx:19: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/condition_variable:110: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/__mutex_base:14: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/chrono:831: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:2: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TFile.h:38: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/mutex:197: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/sstream:173: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/ostream:140: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/locale:189: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/sstream:173: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/ostream:143: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/sstream:174: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/istream:162: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:247: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ make: *** [tmp/classes/ClassesDict.cc] Error 1
- If I just modify the
Makefile
, I get this error message:
>> Generating tmp/classes/ClassesDict.cc In file included from input_line_14:1: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TStreamerInfo.h:21: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TVirtualCollectionProxy.h:26: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TClassRef.h:24: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TClass.h:38: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/unordered_set:367: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:2: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TFile.h:37: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/ROOT/TRWSpinLock.hxx:19: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/condition_variable:110: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/__mutex_base:14: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/chrono:831: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:2: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/TFile.h:38: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/mutex:197: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/sstream:173: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/ostream:140: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/locale:189: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/sstream:173: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/ostream:143: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:246: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/sstream:174: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/istream:162: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ In file included from input_line_14:18: In file included from /Users/surrutiaquir/Software/Python/envs/root6/include/root_std_complex.h:13: In file included from /Users/surrutiaquir/Software/Python/envs/root6/bin/../include/c++/v1/complex:247: /Users/surrutiaquir/Software/MG5_aMC_v2_7_3_py3/Delphes-3.4.2/version:1:1: error: expected unqualified-id 3.4.2 ^ make: *** [tmp/classes/ClassesDict.cc] Error 1
- If I do both,
>> Compiling external/fastjet/ClusterSequence.cc In file included from external/fastjet/ClusterSequence.cc:33: In file included from external/fastjet/ClusterSequence.hh:48: external/fastjet/FunctionOfPseudoJet.hh:34:10: error: 'fastjet/PseudoJet.hh' file not found with <angled> include; use "quotes" instead #include <fastjet/PseudoJet.hh> ^~~~~~~~~~~~~~~~~~~~~~ "fastjet/PseudoJet.hh" external/fastjet/FunctionOfPseudoJet.hh:35:10: error: 'fastjet/Selector.hh' file not found with <angled> include; use "quotes" instead #include <fastjet/Selector.hh> ^~~~~~~~~~~~~~~~~~~~~ "fastjet/Selector.hh" 2 errors generated. make: *** [tmp/external/fastjet/ClusterSequence.o] Error 1
comment:5 by , 4 years ago
You're welcome. Do you know how could I solve my compilation problem? I'm still not able to run Delphes. I even tried to use non-conda version of ROOT (i.e., compiling with cmake) and it works but I need to use the conda environment.
comment:6 by , 4 years ago
Have you tried the latest version from the git repository?
It can be downloaded from the following link:
comment:7 by , 4 years ago
I'm still getting an error:
>> Compiling validation/DelphesValidation.cpp In file included from validation/DelphesValidation.cpp:49: external/ExRootAnalysis/ExRootTreeWriter.h:32:8: warning: 'ExRootTreeWriter::Clear' hides overloaded virtual function [-Woverloaded-virtual] void Clear(); ^ /Users/surrutiaquir/Software/Python/envs/root6/include/TNamed.h:42:21: note: hidden overloaded virtual function 'TNamed::Clear' declared here: different number of parameters (1 vs 0) virtual void Clear(Option_t *option =""); ^ In file included from validation/DelphesValidation.cpp:49: external/ExRootAnalysis/ExRootTreeWriter.h:34:8: warning: 'ExRootTreeWriter::Write' hides overloaded virtual functions [-Woverloaded-virtual] void Write(); ^ /Users/surrutiaquir/Software/Python/envs/root6/include/TObject.h:148:24: note: hidden overloaded virtual function 'TObject::Write' declared here: different number of parameters (3 vs 0) virtual Int_t Write(const char *name=0, Int_t option=0, Int_t b... ^ /Users/surrutiaquir/Software/Python/envs/root6/include/TObject.h:149:24: note: hidden overloaded virtual function 'TObject::Write' declared here: different number of parameters (3 vs 0) virtual Int_t Write(const char *name=0, Int_t option=0, Int_t b... ^ validation/DelphesValidation.cpp:193:3: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete] delete new_bins; ^ [] validation/DelphesValidation.cpp:186:22: note: allocated with 'new[]' here Axis_t *new_bins = new Axis_t[bins + 1]; ^ validation/DelphesValidation.cpp:1196:17: error: allocation of incomplete type 'TF1' TF1 *f1 = new TF1("f1", "gaus", hist->GetMean() - 2 * hist->GetRMS(), ... ^~~ /Users/surrutiaquir/Software/Python/envs/root6/include/TGraph.h:36:7: note: forward declaration of 'TF1' class TF1; ^ validation/DelphesValidation.cpp:1199:37: error: member access into incomplete type 'TF1' TF1 *f2 = new TF1("f2", "gaus", f1->GetParameter(1) - 2 * f1->GetParam... ^ /Users/surrutiaquir/Software/Python/envs/root6/include/TGraph.h:36:7: note: forward declaration of 'TF1' class TF1; ^ validation/DelphesValidation.cpp:1199:84: error: member access into incomplete type 'TF1' ..."gaus", f1->GetParameter(1) - 2 * f1->GetParameter(2), f1->GetParameter(... ^ /Users/surrutiaquir/Software/Python/envs/root6/include/TGraph.h:36:7: note: forward declaration of 'TF1' class TF1; ^ validation/DelphesValidation.cpp:1202:20: error: member access into incomplete type 'TF1' Double_t sig = f2->GetParameter(2); ^ /Users/surrutiaquir/Software/Python/envs/root6/include/TGraph.h:36:7: note: forward declaration of 'TF1' class TF1; ^ validation/DelphesValidation.cpp:1203:23: error: member access into incomplete type 'TF1' Double_t sigErr = f2->GetParError(2); ^ /Users/surrutiaquir/Software/Python/envs/root6/include/TGraph.h:36:7: note: forward declaration of 'TF1' class TF1; ^ validation/DelphesValidation.cpp:1205:3: warning: deleting pointer to incomplete type 'TF1' may cause undefined behavior [-Wdelete-incomplete] delete f1; ^ ~~ /Users/surrutiaquir/Software/Python/envs/root6/include/TGraph.h:36:7: note: forward declaration of 'TF1' class TF1; ^ validation/DelphesValidation.cpp:1206:3: warning: deleting pointer to incomplete type 'TF1' may cause undefined behavior [-Wdelete-incomplete] delete f2; ^ ~~ /Users/surrutiaquir/Software/Python/envs/root6/include/TGraph.h:36:7: note: forward declaration of 'TF1' class TF1; ^ validation/DelphesValidation.cpp:1497:17: warning: unused variable 'branchParticleBJet' [-Wunused-variable] TClonesArray *branchParticleBJet = treeReaderBJet->UseBranch("Particle"); ^ validation/DelphesValidation.cpp:1500:17: warning: unused variable 'branchParticleCJet' [-Wunused-variable] TClonesArray *branchParticleCJet = treeReaderCJet->UseBranch("Particle"); ^ 7 warnings and 5 errors generated. make: *** [tmp/validation/DelphesValidation.o] Error 1
Any ideas?
comment:8 by , 4 years ago
Compilation of DelphesValidation is now disabled. Please try the latest version:
comment:10 by , 3 years ago
Resolution: | → fixed |
---|---|
Status: | new → closed |
The fix is in the new release (3.5.0).
This is caused by the the build system passing
-I/path/to/delphes
to the compiler. As macOS normally uses a case-insensitive filesystem by theVERSION
file in the root of the repository conflicts with the C++ standard library headers.I think this should be fixed by either
VERSION
file being renamedSee this comment for more details:
https://github.com/conda-forge/root-feedstock/issues/103#issuecomment-661787956