- Timestamp:
- Aug 30, 2016, 12:36:00 AM (8 years ago)
- Branches:
- ImprovedOutputFile, Timing, dual_readout, llp, master
- Children:
- 6be4bc0
- Parents:
- d091310
- Location:
- external/fastjet
- Files:
-
- 5 added
- 1 deleted
- 68 edited
Legend:
- Unmodified
- Added
- Removed
-
external/fastjet/CircularRange.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: CircularRange.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: CircularRange.hh 4074 2016-03-08 09:09:25Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 35 35 #include "fastjet/RangeDefinition.hh" 36 36 #include "fastjet/Error.hh" 37 #include "fastjet/internal/deprecated.hh" 37 38 38 39 // for backwards compatibility: one should now use SelectorCircle, … … 50 51 public: 51 52 /// constructor 53 FASTJET_DEPRECATED_MSG("CircularRange is deprecated since FastJet 3.0. Use SelectorCircle instead") 52 54 CircularRange() {_set_invalid_rapphi();} 53 55 54 56 /// initialise CircularRange with a jet 57 FASTJET_DEPRECATED_MSG("CircularRange is deprecated since FastJet 3.0. Use SelectorCircle instead") 55 58 CircularRange(const fastjet::PseudoJet & jet, double distance) { 56 59 _distance = distance; … … 60 63 61 64 /// initialise CircularRange with a (rap,phi) point 65 FASTJET_DEPRECATED_MSG("CircularRange is deprecated since FastJet 3.0. Use SelectorCircle instead") 62 66 CircularRange(double rap, double phi, double distance) { 63 67 _distance = distance; … … 67 71 68 72 /// initialise CircularRange with just the radius parameter 73 FASTJET_DEPRECATED_MSG("CircularRange is deprecated since FastJet 3.0. Use SelectorCircle instead") 69 74 CircularRange(double distance) { 70 75 _set_invalid_rapphi(); … … 76 81 77 82 /// return description of range 78 virtual inline std::string description() const {83 virtual inline std::string description() const FASTJET_OVERRIDE { 79 84 std::ostringstream ostr; 80 85 ostr << "CircularRange: within distance "<< _distance << " of given jet or point." ; … … 83 88 /// returns true since this range is localizable (i.e. set_position 84 89 /// does something meaningful) 85 virtual inline bool is_localizable() const { return true; }90 virtual inline bool is_localizable() const FASTJET_OVERRIDE { return true; } 86 91 87 92 /// return bool according to whether (rap,phi) is in range 88 virtual inline bool is_in_range(double rap, double phi) const {93 virtual inline bool is_in_range(double rap, double phi) const FASTJET_OVERRIDE { 89 94 if (! _rapphi_are_valid()) { 90 95 throw Error("Circular range used without a center having being defined (use set_position())"); … … 98 103 99 104 /// return the minimal and maximal rapidity of this range 100 virtual inline void get_rap_limits(double & rapmin, double & rapmax) const {105 virtual inline void get_rap_limits(double & rapmin, double & rapmax) const FASTJET_OVERRIDE { 101 106 rapmin = _rapjet - _distance; 102 107 rapmax = _rapjet + _distance; } -
external/fastjet/ClosestPair2D.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClosestPair2D.cc 3433 2014-07-23 08:17:03Z salam$2 // $Id: ClosestPair2D.cc 4059 2016-03-03 20:49:48Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 145 145 146 146 // and create the search tree 147 _trees[ishift] = auto_ptr<Tree>(new Tree(shuffles, max_size));147 _trees[ishift] = SharedPtr<Tree>(new Tree(shuffles, max_size)); 148 148 149 149 // now we look for the closest-pair candidates on this tree … … 174 174 mindists2[i] = _points[i].neighbour_dist2;} 175 175 176 _heap = auto_ptr<MinHeap>(new MinHeap(mindists2, max_size));176 _heap = SharedPtr<MinHeap>(new MinHeap(mindists2, max_size)); 177 177 } 178 178 -
external/fastjet/ClusterSequence.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequence.cc 3809 2015-02-20 13:05:13Z soyez $2 // $Id: ClusterSequence.cc 4154 2016-07-20 16:20:48Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 152 152 // set the pointer in the wrapper to this object to NULL to say that 153 153 // we're going out of scope 154 if (_structure_shared_ptr ()){155 ClusterSequenceStructure* csi = dynamic_cast<ClusterSequenceStructure*>(_structure_shared_ptr ());154 if (_structure_shared_ptr){ 155 ClusterSequenceStructure* csi = dynamic_cast<ClusterSequenceStructure*>(_structure_shared_ptr.get()); 156 156 // normally the csi is purely internal so it really should not be 157 157 // NULL i.e assert should be OK … … 724 724 } 725 725 726 bool code_should_never_reach_here = false; 727 assert(code_should_never_reach_here); 726 //bool code_should_never_reach_here = false; 727 //assert(code_should_never_reach_here); 728 729 assert(0 && "Code should never reach here"); 730 728 731 return N2MHTLazy9; 729 732 … … 775 778 776 779 780 ClusterSequence & ClusterSequence::operator=(const ClusterSequence & cs) { 781 // self assignment is trivial 782 if (&cs != this) { 783 _deletes_self_when_unused = false; 784 transfer_from_sequence(cs); 785 } 786 return *this; 787 } 788 777 789 //---------------------------------------------------------------------- 778 790 // transfer the sequence contained in other_seq into our own; … … 815 827 816 828 // clean up existing structure 817 if (_structure_shared_ptr ()) {829 if (_structure_shared_ptr) { 818 830 // If there are jets associated with an old version of the CS and 819 831 // a new one, keeping track of when to delete the CS becomes more … … 823 835 // anything that is currently associated with the cluster sequence 824 836 // should be told that its cluster sequence no longer exists 825 ClusterSequenceStructure* csi = dynamic_cast<ClusterSequenceStructure*>(_structure_shared_ptr ());837 ClusterSequenceStructure* csi = dynamic_cast<ClusterSequenceStructure*>(_structure_shared_ptr.get()); 826 838 assert(csi != NULL); 827 839 csi->set_associated_cs(NULL); … … 1455 1467 // initialise the history in a standard way 1456 1468 void ClusterSequence::_add_step_to_history ( 1457 const int step_number, const int parent1, 1469 //NO_LONGER_USED: const int step_number, 1470 const int parent1, 1458 1471 const int parent2, const int jetp_index, 1459 1472 const double dij) { … … 1469 1482 1470 1483 int local_step = _history.size()-1; 1471 assert(local_step == step_number); 1484 //#ifndef __NO_ASSERTS__ 1485 //assert(local_step == step_number); 1486 //#endif 1472 1487 1473 1488 // sanity check: make sure the particles have not already been recombined … … 1669 1684 int hist_j = _jets[jet_j].cluster_hist_index(); 1670 1685 1671 _add_step_to_history( newstep_k,min(hist_i, hist_j), max(hist_i,hist_j),1686 _add_step_to_history(min(hist_i, hist_j), max(hist_i,hist_j), 1672 1687 newjet_k, dij); 1688 1689 // _add_step_to_history(newstep_k, min(hist_i, hist_j), max(hist_i,hist_j), 1690 // newjet_k, dij); 1691 1673 1692 1674 1693 } … … 1680 1699 void ClusterSequence::_do_iB_recombination_step( 1681 1700 const int jet_i, const double diB) { 1682 // get history index1683 int newstep_k = _history.size();1684 1685 1701 // recombine the jet with the beam 1686 _add_step_to_history( newstep_k,_jets[jet_i].cluster_hist_index(),BeamJet,1702 _add_step_to_history(_jets[jet_i].cluster_hist_index(),BeamJet, 1687 1703 Invalid, diB); 1704 1705 // // get history index 1706 // int newstep_k = _history.size(); 1707 // 1708 // _add_step_to_history(newstep_k,_jets[jet_i].cluster_hist_index(),BeamJet, 1709 // Invalid, diB); 1688 1710 1689 1711 } -
external/fastjet/ClusterSequence.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: ClusterSequence.hh 3911 2015-07-02 12:09:58Z salam$5 // $Id: ClusterSequence.hh 4154 2016-07-20 16:20:48Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 49 49 #include "fastjet/ClusterSequenceStructure.hh" 50 50 51 #include "fastjet/internal/deprecated.hh" 52 51 53 FASTJET_BEGIN_NAMESPACE // defined in fastjet/internal/base.hh 52 54 … … 80 82 } 81 83 84 /// explicit assignment operator for a ClusterSequence 85 ClusterSequence & operator=(const ClusterSequence & cs); 86 82 87 // virtual ClusterSequence destructor, in case any derived class 83 88 // thinks of needing a destructor at some point … … 362 367 /// As of FJ v3.1, this is deprecated, in line with the deprecation 363 368 /// of auto_ptr in C++11 364 inline void plugin_associate_extras(std::auto_ptr<Extras> extras_in) { 369 #ifdef FASTJET_HAVE_AUTO_PTR_INTERFACE 370 FASTJET_DEPRECATED_MSG("Please use ClusterSequence::plugin_associate_extras(Extras * extras_in)) instead") 371 inline void plugin_associate_extras(std::auto_ptr<Extras> extras_in){ 365 372 _extras.reset(extras_in.release()); 366 373 } 374 #endif 367 375 368 376 /// returns true when the plugin is allowed to run the show. … … 730 738 void _fast_NsqrtN_cluster(); 731 739 732 void _add_step_to_history(const int step_number, const int parent1, 733 const int parent2, const int jetp_index, 734 const double dij); 740 void _add_step_to_history( //const int step_number, 741 const int parent1, 742 const int parent2, const int jetp_index, 743 const double dij); 735 744 736 745 /// internal routine associated with the construction of the unique … … 1037 1046 template <class J> inline double ClusterSequence::_bj_dist( 1038 1047 const J * const jetA, const J * const jetB) const { 1048 //#define FASTJET_NEW_DELTA_PHI 1049 #ifndef FASTJET_NEW_DELTA_PHI 1050 //GPS+MC old version of Delta phi calculation 1039 1051 double dphi = std::abs(jetA->phi - jetB->phi); 1040 1052 double deta = (jetA->eta - jetB->eta); 1041 1053 if (dphi > pi) {dphi = twopi - dphi;} 1054 #else 1055 //GPS+MC testing for 2015-02-faster-deltaR2 1056 double dphi = pi-std::abs(pi-std::abs(jetA->phi - jetB->phi)); 1057 double deta = (jetA->eta - jetB->eta); 1058 #endif 1042 1059 return dphi*dphi + deta*deta; 1043 1060 } -
external/fastjet/ClusterSequence1GhostPassiveArea.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequence1GhostPassiveArea.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: ClusterSequence1GhostPassiveArea.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 70 70 /// AreaBase one rather than the ActiveArea one (which for which we 71 71 /// do not have the information). 72 virtual double n_empty_jets(const Selector & selector) const {72 virtual double n_empty_jets(const Selector & selector) const FASTJET_OVERRIDE { 73 73 return ClusterSequenceAreaBase::n_empty_jets(selector); 74 74 } -
external/fastjet/ClusterSequenceActiveArea.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequenceActiveArea.hh 3619 2014-08-13 14:17:19Z salam$2 // $Id: ClusterSequenceActiveArea.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 74 74 const bool & writeout_combinations = false) ; 75 75 76 virtual double area (const PseudoJet & jet) const {76 virtual double area (const PseudoJet & jet) const FASTJET_OVERRIDE { 77 77 return _average_area[jet.cluster_hist_index()];}; 78 virtual double area_error (const PseudoJet & jet) const {78 virtual double area_error (const PseudoJet & jet) const FASTJET_OVERRIDE { 79 79 return _average_area2[jet.cluster_hist_index()];}; 80 80 81 virtual PseudoJet area_4vector (const PseudoJet & jet) const {81 virtual PseudoJet area_4vector (const PseudoJet & jet) const FASTJET_OVERRIDE { 82 82 return _average_area_4vector[jet.cluster_hist_index()];}; 83 83 … … 110 110 /// 111 111 /// The selector passed as an argument needs to apply jet by jet. 112 virtual double empty_area(const Selector & selector) const ;112 virtual double empty_area(const Selector & selector) const FASTJET_OVERRIDE; 113 113 114 114 /// return the true number of empty jets (replaces 115 115 /// ClusterSequenceAreaBase::n_empty_jets(...)) 116 virtual double n_empty_jets(const Selector & selector) const ;116 virtual double n_empty_jets(const Selector & selector) const FASTJET_OVERRIDE; 117 117 118 118 protected: -
external/fastjet/ClusterSequenceActiveAreaExplicitGhosts.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequenceActiveAreaExplicitGhosts.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: ClusterSequenceActiveAreaExplicitGhosts.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 97 97 98 98 /// returns the area of a jet 99 virtual double area (const PseudoJet & jet) const ;99 virtual double area (const PseudoJet & jet) const FASTJET_OVERRIDE; 100 100 101 101 /// returns a four vector corresponding to the sum (E-scheme) of the … … 103 103 /// for a small contiguous area the p_t of the extended_area jet is 104 104 /// equal to area of the jet. 105 virtual PseudoJet area_4vector (const PseudoJet & jet) const ;105 virtual PseudoJet area_4vector (const PseudoJet & jet) const FASTJET_OVERRIDE; 106 106 107 107 /// true if a jet is made exclusively of ghosts 108 virtual bool is_pure_ghost(const PseudoJet & jet) const ;108 virtual bool is_pure_ghost(const PseudoJet & jet) const FASTJET_OVERRIDE; 109 109 110 110 /// true if the entry in the history index corresponds to a … … 114 114 115 115 /// this class does have explicit ghosts 116 virtual bool has_explicit_ghosts() const {return true;}116 virtual bool has_explicit_ghosts() const FASTJET_OVERRIDE {return true;} 117 117 118 118 /// return the total area, corresponding to a given Selector, that … … 120 120 /// 121 121 /// The selector needs to apply jet by jet 122 virtual double empty_area(const Selector & selector) const ;122 virtual double empty_area(const Selector & selector) const FASTJET_OVERRIDE; 123 123 124 124 /// returns the total area under study -
external/fastjet/ClusterSequenceArea.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequenceArea.hh 3484 2014-07-29 21:39:39Z soyez$2 // $Id: ClusterSequenceArea.hh 4098 2016-03-15 16:38:22Z salam $ 3 3 // 4 4 // Copyright (c) 2006-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 80 80 81 81 /// return the area associated with the given jet 82 virtual double area (const PseudoJet & jet) const {82 virtual double area (const PseudoJet & jet) const FASTJET_OVERRIDE { 83 83 return _area_base->area(jet);} 84 84 85 85 /// return the error (uncertainty) associated with the determination 86 86 /// of the area of this jet 87 virtual double area_error (const PseudoJet & jet) const {87 virtual double area_error (const PseudoJet & jet) const FASTJET_OVERRIDE { 88 88 return _area_base->area_error(jet);} 89 89 90 90 /// return the 4-vector area 91 virtual PseudoJet area_4vector(const PseudoJet & jet) const {91 virtual PseudoJet area_4vector(const PseudoJet & jet) const FASTJET_OVERRIDE { 92 92 return _area_base->area_4vector(jet);} 93 93 … … 110 110 /// jet (see the BackgroundEstimator and Subtractor tools for more 111 111 /// advanced usage) 112 virtual double empty_area(const Selector & selector) const {112 virtual double empty_area(const Selector & selector) const FASTJET_OVERRIDE { 113 113 return _area_base->empty_area(selector);} 114 114 … … 122 122 /// jet (see the BackgroundEstimator and Subtractor tools for more 123 123 /// advanced usage) 124 virtual double n_empty_jets(const Selector & selector) const {124 virtual double n_empty_jets(const Selector & selector) const FASTJET_OVERRIDE { 125 125 return _area_base->n_empty_jets(selector); 126 126 } 127 127 128 128 /// true if a jet is made exclusively of ghosts 129 virtual bool is_pure_ghost(const PseudoJet & jet) const {129 virtual bool is_pure_ghost(const PseudoJet & jet) const FASTJET_OVERRIDE { 130 130 return _area_base->is_pure_ghost(jet); 131 131 } 132 132 133 133 /// true if this ClusterSequence has explicit ghosts 134 virtual bool has_explicit_ghosts() const {134 virtual bool has_explicit_ghosts() const FASTJET_OVERRIDE { 135 135 return _area_base->has_explicit_ghosts(); 136 136 } … … 144 144 /// jet (see the BackgroundEstimator and Subtractor tools for more 145 145 /// advanced usage) 146 //FASTJET_DEPRECATED_MSG("ClusterSequenceArea::get_median_rho_and_sigma(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 146 147 virtual void get_median_rho_and_sigma(const std::vector<PseudoJet> & all_jets, 147 148 const Selector & selector, … … 149 150 double & median, double & sigma, 150 151 double & mean_area, 151 bool all_are_incl = false) const {152 bool all_are_incl = false) const FASTJET_OVERRIDE { 152 153 _warn_if_range_unsuitable(selector); 153 ClusterSequenceAreaBase:: get_median_rho_and_sigma(154 ClusterSequenceAreaBase::_get_median_rho_and_sigma( 154 155 all_jets, selector, use_area_4vector, 155 156 median, sigma, mean_area, all_are_incl); … … 160 161 /// since we've overridden the 5-argument version above, we have to 161 162 /// override the 4-argument version too. 163 //FASTJET_DEPRECATED_MSG("ClusterSequenceArea::get_median_rho_and_sigma(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 162 164 virtual void get_median_rho_and_sigma(const Selector & selector, 163 165 bool use_area_4vector, 164 double & median, double & sigma) const {165 ClusterSequenceAreaBase:: get_median_rho_and_sigma(selector,use_area_4vector,166 median,sigma);166 double & median, double & sigma) const FASTJET_OVERRIDE { 167 ClusterSequenceAreaBase::_get_median_rho_and_sigma(selector,use_area_4vector, 168 median,sigma); 167 169 } 168 170 … … 171 173 /// since we've overridden the multi-argument version above, we have to 172 174 /// override the 5-argument version too. 175 //FASTJET_DEPRECATED_MSG("ClusterSequenceArea::get_median_rho_and_sigma(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 173 176 virtual void get_median_rho_and_sigma(const Selector & selector, 174 177 bool use_area_4vector, 175 178 double & median, double & sigma, 176 double & mean_area) const {177 ClusterSequenceAreaBase:: get_median_rho_and_sigma(selector,use_area_4vector,178 median,sigma, mean_area);179 double & mean_area) const FASTJET_OVERRIDE { 180 ClusterSequenceAreaBase::_get_median_rho_and_sigma(selector,use_area_4vector, 181 median,sigma, mean_area); 179 182 } 180 183 … … 183 186 /// additionally checks compatibility between "range" and region in which 184 187 /// ghosts are thrown. 188 //FASTJET_DEPRECATED_MSG("ClusterSequenceArea::parabolic_pt_per_unit_area(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 185 189 virtual void parabolic_pt_per_unit_area(double & a, double & b, 186 190 const Selector & selector, 187 191 double exclude_above=-1.0, 188 bool use_area_4vector=false) const { 189 _warn_if_range_unsuitable(selector); 190 ClusterSequenceAreaBase::parabolic_pt_per_unit_area( 191 a,b,selector, exclude_above, use_area_4vector); 192 bool use_area_4vector=false) const FASTJET_OVERRIDE { 193 return _parabolic_pt_per_unit_area(a,b,selector,exclude_above,use_area_4vector); 192 194 } 193 195 … … 204 206 const JetDefinition & jet_def); 205 207 206 std::auto_ptr<ClusterSequenceAreaBase> _area_base;208 SharedPtr<ClusterSequenceAreaBase> _area_base; 207 209 AreaDefinition _area_def; 208 210 static LimitedWarning _range_warnings; 209 211 static LimitedWarning _explicit_ghosts_repeats_warnings; 212 213 // the following set of private methods are all deprecated. Their 214 // role is simply to hide the corresponding methods (without the 215 // first underscore) from the public interface so that they can be 216 // used internally until all the deprecated methods are removed. 217 // DO NOT USE ANY OF THESE METHODS: THEY ARE DEPRECATED AND WILL BE 218 // REMOVED. 219 virtual void _parabolic_pt_per_unit_area(double & a, double & b, 220 const Selector & selector, 221 double exclude_above=-1.0, 222 bool use_area_4vector=false) const FASTJET_OVERRIDE { 223 _warn_if_range_unsuitable(selector); 224 ClusterSequenceAreaBase::_parabolic_pt_per_unit_area( 225 a,b,selector, exclude_above, use_area_4vector); 226 } 210 227 211 228 }; … … 254 271 } 255 272 // now copy across the information from the area base class 256 _area_base = std::auto_ptr<ClusterSequenceAreaBase>(_area_base_ptr);273 _area_base = SharedPtr<ClusterSequenceAreaBase>(_area_base_ptr); 257 274 transfer_from_sequence(*_area_base); 258 275 } -
external/fastjet/ClusterSequenceAreaBase.cc
rd091310 r1d208a2 1 1 2 2 //FJSTARTHEADER 3 // $Id: ClusterSequenceAreaBase.cc 3433 2014-07-23 08:17:03Z salam$3 // $Id: ClusterSequenceAreaBase.cc 4079 2016-03-09 12:20:03Z soyez $ 4 4 // 5 5 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 79 79 } 80 80 81 // this is deprecated but used by other deprecated methods. So we hide 82 // the implementation in a protected method so that (i) it can still 83 // be used internally (without generating a compile-time warning when 84 // building FastJet) and the interface can be marked as deprecated. 85 // This can disappear once all the public interfaces have disappeared. 81 86 double ClusterSequenceAreaBase::median_pt_per_unit_area(const Selector & selector) const { 82 return median_pt_per_unit_something(selector,false); 83 } 84 87 return _median_pt_per_unit_area(selector); 88 } 89 90 // the hidden implementation 91 double ClusterSequenceAreaBase::_median_pt_per_unit_area(const Selector & selector) const { 92 return _median_pt_per_unit_something(selector,false); 93 } 94 95 96 97 // this is deprecated but used by other deprecated methods. So we hide 98 // the implementation in a protected method so that (i) it can still 99 // be used internally (without generating a compile-time warning when 100 // building FastJet) and the interface can be marked as deprecated. 101 // This can disappear once all the public interfaces have disappeared. 85 102 double ClusterSequenceAreaBase::median_pt_per_unit_area_4vector(const Selector & selector) const { 86 return median_pt_per_unit_something(selector,true); 87 } 88 89 90 //---------------------------------------------------------------------- 91 /// the median of (pt/area) for jets contained within range, counting 92 /// the empty area as if it were made up of a collection of empty 93 /// jets each of area (0.55 * pi R^2). 103 return _median_pt_per_unit_area_4vector(selector); 104 } 105 106 // the deprecated interface 107 double ClusterSequenceAreaBase::_median_pt_per_unit_area_4vector(const Selector & selector) const { 108 return _median_pt_per_unit_something(selector,true); 109 } 110 111 112 //---------------------------------------------------------------------- 113 // this is deprecated but used by other deprecated methods. So we hide 114 // the implementation in a protected method so that (i) it can still 115 // be used internally (without generating a compile-time warning when 116 // building FastJet) and the interface can be marked as deprecated. 117 // This can disappear once all the public interfaces have disappeared. 94 118 double ClusterSequenceAreaBase::median_pt_per_unit_something( 95 119 const Selector & selector, bool use_area_4vector) const { 96 120 return _median_pt_per_unit_something(selector, use_area_4vector); 121 } 122 123 // the median of (pt/area) for jets contained within range, counting 124 // the empty area as if it were made up of a collection of empty 125 // jets each of area (0.55 * pi R^2). 126 double ClusterSequenceAreaBase::_median_pt_per_unit_something( 127 const Selector & selector, bool use_area_4vector) const { 97 128 double median, sigma, mean_area; 98 get_median_rho_and_sigma(selector, use_area_4vector, median, sigma, mean_area);129 _get_median_rho_and_sigma(selector, use_area_4vector, median, sigma, mean_area); 99 130 return median; 100 101 } 102 103 104 //---------------------------------------------------------------------- 105 /// fits a form pt_per_unit_area(y) = a + b*y^2 for jets in range. 106 /// exclude_above allows one to exclude large values of pt/area from fit. 107 /// use_area_4vector = true uses the 4vector areas. 131 } 132 133 134 //---------------------------------------------------------------------- 135 /// fits a form pt_per_unit_area(y) = a + b*y^2 for jets in range. 136 /// exclude_above allows one to exclude large values of pt/area from 137 /// fit. use_area_4vector = true uses the 4vector areas. 108 138 void ClusterSequenceAreaBase::parabolic_pt_per_unit_area( 139 double & a, double & b, const Selector & selector, 140 double exclude_above, bool use_area_4vector) const { 141 return _parabolic_pt_per_unit_area(a, b, selector, exclude_above, use_area_4vector); 142 } 143 144 void ClusterSequenceAreaBase::_parabolic_pt_per_unit_area( 109 145 double & a, double & b, const Selector & selector, 110 146 double exclude_above, bool use_area_4vector) const { … … 161 197 162 198 163 199 //---------------------------------------------------------------------- 164 200 void ClusterSequenceAreaBase::get_median_rho_and_sigma( 165 201 const Selector & selector, bool use_area_4vector, 166 202 double & median, double & sigma, double & mean_area) const { 203 _get_median_rho_and_sigma(selector, use_area_4vector, median, sigma, mean_area); 204 } 205 206 void ClusterSequenceAreaBase::_get_median_rho_and_sigma( 207 const Selector & selector, bool use_area_4vector, 208 double & median, double & sigma, double & mean_area) const { 167 209 168 210 vector<PseudoJet> incl_jets = inclusive_jets(); 169 get_median_rho_and_sigma(incl_jets, selector, use_area_4vector, 170 median, sigma, mean_area, true); 171 } 172 211 _get_median_rho_and_sigma(incl_jets, selector, use_area_4vector, 212 median, sigma, mean_area, true); 213 } 173 214 174 215 void ClusterSequenceAreaBase::get_median_rho_and_sigma( 216 const vector<PseudoJet> & all_jets, 217 const Selector & selector, bool use_area_4vector, 218 double & median, double & sigma, double & mean_area, 219 bool all_are_incl) const { 220 _get_median_rho_and_sigma(all_jets, selector, use_area_4vector, 221 median, sigma, mean_area, all_are_incl); 222 } 223 224 void ClusterSequenceAreaBase::_get_median_rho_and_sigma( 175 225 const vector<PseudoJet> & all_jets, 176 226 const Selector & selector, bool use_area_4vector, … … 288 338 289 339 290 // /return a vector of all subtracted jets, using area_4vector, given rho.291 // /Only inclusive_jets above ptmin are subtracted and returned.292 // /the ordering is the same as that of sorted_by_pt(cs.inclusive_jets()),293 // /i.e. not necessarily ordered in pt once subtracted340 // return a vector of all subtracted jets, using area_4vector, given rho. 341 // Only inclusive_jets above ptmin are subtracted and returned. 342 // the ordering is the same as that of sorted_by_pt(cs.inclusive_jets()), 343 // i.e. not necessarily ordered in pt once subtracted 294 344 vector<PseudoJet> ClusterSequenceAreaBase::subtracted_jets(const double rho, 295 345 const double ptmin) 296 346 const { 347 return _subtracted_jets(rho,ptmin); 348 } 349 350 vector<PseudoJet> ClusterSequenceAreaBase::_subtracted_jets(const double rho, 351 const double ptmin) 352 const { 297 353 vector<PseudoJet> sub_jets; 298 354 vector<PseudoJet> jets_local = sorted_by_pt(inclusive_jets(ptmin)); 299 355 for (unsigned i=0; i<jets_local.size(); i++) { 300 PseudoJet sub_jet = subtracted_jet(jets_local[i],rho);356 PseudoJet sub_jet = _subtracted_jet(jets_local[i],rho); 301 357 sub_jets.push_back(sub_jet); 302 358 } … … 304 360 } 305 361 306 // /return a vector of subtracted jets, using area_4vector.307 // /Only inclusive_jets above ptmin are subtracted and returned.308 // /the ordering is the same as that of sorted_by_pt(cs.inclusive_jets()),309 // /i.e. not necessarily ordered in pt once subtracted362 // return a vector of subtracted jets, using area_4vector. 363 // Only inclusive_jets above ptmin are subtracted and returned. 364 // the ordering is the same as that of sorted_by_pt(cs.inclusive_jets()), 365 // i.e. not necessarily ordered in pt once subtracted 310 366 vector<PseudoJet> ClusterSequenceAreaBase::subtracted_jets( 311 367 const Selector & selector, 312 368 const double ptmin) 313 369 const { 314 double rho = median_pt_per_unit_area_4vector(selector);315 return subtracted_jets(rho,ptmin);370 double rho = _median_pt_per_unit_area_4vector(selector); 371 return _subtracted_jets(rho,ptmin); 316 372 } 317 373 … … 320 376 PseudoJet ClusterSequenceAreaBase::subtracted_jet(const PseudoJet & jet, 321 377 const double rho) const { 378 return _subtracted_jet(jet, rho); 379 } 380 381 PseudoJet ClusterSequenceAreaBase::_subtracted_jet(const PseudoJet & jet, 382 const double rho) const { 322 383 PseudoJet area4vect = area_4vector(jet); 323 384 PseudoJet sub_jet; … … 343 404 PseudoJet ClusterSequenceAreaBase::subtracted_jet(const PseudoJet & jet, 344 405 const Selector & selector) const { 345 double rho = median_pt_per_unit_area_4vector(selector); 346 PseudoJet sub_jet = subtracted_jet(jet, rho); 406 return _subtracted_jet(jet, selector); 407 } 408 409 PseudoJet ClusterSequenceAreaBase::_subtracted_jet(const PseudoJet & jet, 410 const Selector & selector) const { 411 double rho = _median_pt_per_unit_area_4vector(selector); 412 PseudoJet sub_jet = _subtracted_jet(jet, rho); 347 413 return sub_jet; 348 414 } … … 353 419 const double rho, 354 420 bool use_area_4vector) const { 421 return _subtracted_pt(jet, rho, use_area_4vector); 422 } 423 424 double ClusterSequenceAreaBase::_subtracted_pt(const PseudoJet & jet, 425 const double rho, 426 bool use_area_4vector) const { 355 427 if ( use_area_4vector ) { 356 PseudoJet sub_jet = subtracted_jet(jet,rho);428 PseudoJet sub_jet = _subtracted_jet(jet,rho); 357 429 return sub_jet.perp(); 358 430 } else { … … 369 441 bool use_area_4vector) const { 370 442 if ( use_area_4vector ) { 371 PseudoJet sub_jet = subtracted_jet(jet,selector);443 PseudoJet sub_jet = _subtracted_jet(jet,selector); 372 444 return sub_jet.perp(); 373 445 } else { 374 double rho = median_pt_per_unit_area(selector);375 return subtracted_pt(jet,rho,false);446 double rho = _median_pt_per_unit_area(selector); 447 return _subtracted_pt(jet,rho,false); 376 448 } 377 449 } -
external/fastjet/ClusterSequenceAreaBase.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequenceAreaBase.hh 3433 2014-07-23 08:17:03Z salam $2 // $Id: ClusterSequenceAreaBase.hh 4098 2016-03-15 16:38:22Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 35 35 #include "fastjet/LimitedWarning.hh" 36 36 #include "fastjet/Selector.hh" 37 #include "fastjet/internal/deprecated.hh" 37 38 38 39 FASTJET_BEGIN_NAMESPACE … … 144 145 /// apply jet-by-jet (see the BackgroundEstimator and Subtractor 145 146 /// tools for more generic usages) 147 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::median_pt_per_unit_area(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 146 148 double median_pt_per_unit_area(const Selector & selector) const; 147 149 … … 151 153 /// The selector passed as an argument has to have a finite area and 152 154 /// apply jet-by-jet 155 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::median_pt_per_unit_area_4vector(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 153 156 double median_pt_per_unit_area_4vector(const Selector & selector) const; 154 157 … … 157 160 /// - something_is_area_4vect = false -> use plain area 158 161 /// - something_is_area_4vect = true -> use 4-vector area 159 double median_pt_per_unit_something( 160 const Selector & selector, bool use_area_4vector) const; 162 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::median_pt_per_unit_something(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 163 double median_pt_per_unit_something(const Selector & selector, 164 bool use_area_4vector) const; 161 165 162 166 /// using jets withing the selector range (and with 4-vector areas if … … 184 188 /// using a scalar area causes one to neglect terms of relative 185 189 /// order $R^2/8$ in the jet $p_t$. 190 //FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::get_median_rho_and_sigma(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 186 191 virtual void get_median_rho_and_sigma(const Selector & selector, 187 192 bool use_area_4vector, … … 208 213 /// apply jet-by-jet (see the BackgroundEstimator and Subtractor 209 214 /// tools for more generic usages) 215 //FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::get_median_rho_and_sigma(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 210 216 virtual void get_median_rho_and_sigma(const std::vector<PseudoJet> & all_jets, 211 217 const Selector & selector, … … 221 227 /// apply jet-by-jet (see the BackgroundEstimator and Subtractor 222 228 /// tools for more generic usages) 229 //FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::get_median_rho_and_sigma(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 223 230 virtual void get_median_rho_and_sigma(const Selector & selector, 224 bool use_area_4vector, 225 double & median, double & sigma) const { 226 double mean_area; 227 get_median_rho_and_sigma(selector, use_area_4vector, 228 median, sigma, mean_area); 231 bool use_area_4vector, 232 double & median, double & sigma) const{ 233 return _get_median_rho_and_sigma(selector, use_area_4vector, median, sigma); 229 234 } 230 235 … … 238 243 /// apply jet-by-jet (see the BackgroundEstimator and Subtractor 239 244 /// tools for more generic usages) 245 //FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::parabolic_pt_per_unit_area(...) is deprecated since FastJet 3.0. Use the BackgroundEstimator series of tools instead") 240 246 virtual void parabolic_pt_per_unit_area(double & a, double & b, 241 247 const Selector & selector, … … 247 253 /// the ordering is the same as that of sorted_by_pt(cs.inclusive_jets()), 248 254 /// i.e. not necessarily ordered in pt once subtracted 255 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::subtracted_jets(...) is deprecated since FastJet 3.0. Use the Subtractor tool (with the BackgroundEstimator series of tools) instead") 249 256 std::vector<PseudoJet> subtracted_jets(const double rho, 250 257 const double ptmin=0.0) const; … … 258 265 /// apply jet-by-jet (see the BackgroundEstimator and Subtractor 259 266 /// tools for more generic usages) 267 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::subtracted_jets(...) is deprecated since FastJet 3.0. Use the Subtractor tool (with the BackgroundEstimator series of tools) instead") 260 268 std::vector<PseudoJet> subtracted_jets(const Selector & selector, 261 269 const double ptmin=0.0) const; 262 270 263 271 /// return a subtracted jet, using area_4vector, given rho 272 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::subtracted_jet(...) is deprecated since FastJet 3.0. Use the Subtractor tool (with the BackgroundEstimator series of tools) instead") 264 273 PseudoJet subtracted_jet(const PseudoJet & jet, 265 274 const double rho) const; … … 273 282 /// apply jet-by-jet (see the BackgroundEstimator and Subtractor 274 283 /// tools for more generic usages) 284 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::subtracted_jet(...) is deprecated since FastJet 3.0. Use the Subtractor tool (with the BackgroundEstimator series of tools) instead") 275 285 PseudoJet subtracted_jet(const PseudoJet & jet, 276 286 const Selector & selector) const; 277 287 278 288 /// return the subtracted pt, given rho 289 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::subtracted_pt(...) is deprecated since FastJet 3.0. Use the Subtractor tool (with the BackgroundEstimator series of tools) instead") 279 290 double subtracted_pt(const PseudoJet & jet, 280 291 const double rho, … … 288 299 /// apply jet-by-jet (see the BackgroundEstimator and Subtractor 289 300 /// tools for more generic usages) 301 FASTJET_DEPRECATED_MSG("ClusterSequenceAreaBase::subtracted_pt(...) is deprecated since FastJet 3.0. Use the Subtractor tool (with the BackgroundEstimator series of tools) instead") 290 302 double subtracted_pt(const PseudoJet & jet, 291 303 const Selector & selector, … … 296 308 void _check_selector_good_for_median(const Selector &selector) const; 297 309 310 // the following set of protected methods are all deprecated. Their 311 // role is simply to hide the corresponding methods (without the 312 // first underscore) from the public interface so that they can be 313 // used internally until all the deprecated methods are removed. 314 // DO NOT USE ANY OF THESE METHODS: THEY ARE DEPRECATED AND WILL BE 315 // REMOVED. 316 virtual void _get_median_rho_and_sigma(const Selector & selector, 317 bool use_area_4vector, 318 double & median, double & sigma, 319 double & mean_area) const; 320 virtual void _get_median_rho_and_sigma(const std::vector<PseudoJet> & all_jets, 321 const Selector & selector, 322 bool use_area_4vector, 323 double & median, double & sigma, 324 double & mean_area, 325 bool all_are_inclusive = false) const; 326 virtual void _get_median_rho_and_sigma(const Selector & selector, 327 bool use_area_4vector, 328 double & median, double & sigma) const { 329 double mean_area; 330 _get_median_rho_and_sigma(selector, use_area_4vector, 331 median, sigma, mean_area); 332 } 333 virtual void _parabolic_pt_per_unit_area(double & a, double & b, 334 const Selector & selector, 335 double exclude_above=-1.0, 336 bool use_area_4vector=false) const; 298 337 299 338 private: … … 305 344 /// check the jet algorithm is suitable (and if not issue a warning) 306 345 void _check_jet_alg_good_for_median() const; 307 346 347 // the following set of private methods are all deprecated. Their 348 // role is simply to hide the corresponding methods (without the 349 // first underscore) from the public interface so that they can be 350 // used internally until all the deprecated methods are removed. 351 // DO NOT USE ANY OF THESE METHODS: THEY ARE DEPRECATED AND WILL BE 352 // REMOVED. 353 double _median_pt_per_unit_area(const Selector & selector) const; 354 double _median_pt_per_unit_area_4vector(const Selector & selector) const; 355 double _median_pt_per_unit_something(const Selector & selector, 356 bool use_area_4vector) const; 357 std::vector<PseudoJet> _subtracted_jets(const double rho, 358 const double ptmin=0.0) const; 359 PseudoJet _subtracted_jet(const PseudoJet & jet, 360 const double rho) const; 361 PseudoJet _subtracted_jet(const PseudoJet & jet, 362 const Selector & selector) const; 363 double _subtracted_pt(const PseudoJet & jet, 364 const double rho, 365 bool use_area_4vector=false) const; 308 366 }; 309 367 -
external/fastjet/ClusterSequencePassiveArea.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequencePassiveArea.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: ClusterSequencePassiveArea.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 65 65 /// return an empty area that's appropriate to the passive area 66 66 /// determination carried out 67 virtual double empty_area(const Selector & selector) const ;67 virtual double empty_area(const Selector & selector) const FASTJET_OVERRIDE; 68 68 69 69 private: -
external/fastjet/ClusterSequenceStructure.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequenceStructure.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: ClusterSequenceStructure.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 76 76 77 77 /// description 78 virtual std::string description() const{ return "PseudoJet with an associated ClusterSequence"; } 78 virtual std::string description() const FASTJET_OVERRIDE{ 79 return "PseudoJet with an associated ClusterSequence"; 80 } 79 81 80 82 //------------------------------------------------------------- … … 85 87 //------------------------------------------------------------- 86 88 /// returns true if there is an associated ClusterSequence 87 virtual bool has_associated_cluster_sequence() const { return true;}89 virtual bool has_associated_cluster_sequence() const FASTJET_OVERRIDE{ return true;} 88 90 89 91 /// get a (const) pointer to the parent ClusterSequence (NULL if 90 92 /// inexistent) 91 virtual const ClusterSequence* associated_cluster_sequence() const ;93 virtual const ClusterSequence* associated_cluster_sequence() const FASTJET_OVERRIDE; 92 94 93 95 /// returns true if there is a valid associated ClusterSequence 94 virtual bool has_valid_cluster_sequence() const ;96 virtual bool has_valid_cluster_sequence() const FASTJET_OVERRIDE; 95 97 96 98 /// if the jet has a valid associated cluster sequence then return a 97 99 /// pointer to it; otherwise throw an error 98 virtual const ClusterSequence * validated_cs() const ;100 virtual const ClusterSequence * validated_cs() const FASTJET_OVERRIDE; 99 101 100 102 #ifndef __FJCORE__ 101 103 /// if the jet has valid area information then return a pointer to 102 104 /// the associated ClusterSequenceAreaBase object; otherwise throw an error 103 virtual const ClusterSequenceAreaBase * validated_csab() const ;105 virtual const ClusterSequenceAreaBase * validated_csab() const FASTJET_OVERRIDE; 104 106 #endif // __FJCORE__ 105 107 … … 125 127 /// an Error is thrown if this PseudoJet has no currently valid 126 128 /// associated ClusterSequence 127 virtual bool has_partner(const PseudoJet &reference, PseudoJet &partner) const ;129 virtual bool has_partner(const PseudoJet &reference, PseudoJet &partner) const FASTJET_OVERRIDE; 128 130 129 131 /// check if it has been recombined with another PseudoJet in which … … 133 135 /// an Error is thrown if this PseudoJet has no currently valid 134 136 /// associated ClusterSequence 135 virtual bool has_child(const PseudoJet &reference, PseudoJet &child) const ;137 virtual bool has_child(const PseudoJet &reference, PseudoJet &child) const FASTJET_OVERRIDE; 136 138 137 139 /// check if it is the product of a recombination, in which case … … 141 143 /// an Error is thrown if this PseudoJet has no currently valid 142 144 /// associated ClusterSequence 143 virtual bool has_parents(const PseudoJet &reference, PseudoJet &parent1, PseudoJet &parent2) const ;145 virtual bool has_parents(const PseudoJet &reference, PseudoJet &parent1, PseudoJet &parent2) const FASTJET_OVERRIDE; 144 146 145 147 /// check if the reference PseudoJet is contained in the second one … … 151 153 /// false is returned if the 2 PseudoJet do not belong the same 152 154 /// ClusterSequence 153 virtual bool object_in_jet(const PseudoJet &reference, const PseudoJet &jet) const ;155 virtual bool object_in_jet(const PseudoJet &reference, const PseudoJet &jet) const FASTJET_OVERRIDE; 154 156 155 157 /// return true if the structure supports constituents. … … 157 159 /// an Error is thrown if this PseudoJet has no currently valid 158 160 /// associated ClusterSequence 159 virtual bool has_constituents() const ;161 virtual bool has_constituents() const FASTJET_OVERRIDE; 160 162 161 163 /// retrieve the constituents. … … 163 165 /// an Error is thrown if this PseudoJet has no currently valid 164 166 /// associated ClusterSequence 165 virtual std::vector<PseudoJet> constituents(const PseudoJet &reference) const ;167 virtual std::vector<PseudoJet> constituents(const PseudoJet &reference) const FASTJET_OVERRIDE; 166 168 167 169 … … 170 172 /// an Error is thrown if this PseudoJet has no currently valid 171 173 /// associated ClusterSequence 172 virtual bool has_exclusive_subjets() const ;174 virtual bool has_exclusive_subjets() const FASTJET_OVERRIDE; 173 175 174 176 /// return a vector of all subjets of the current jet (in the sense … … 183 185 /// an Error is thrown if this PseudoJet has no currently valid 184 186 /// associated ClusterSequence 185 virtual std::vector<PseudoJet> exclusive_subjets(const PseudoJet &reference, const double & dcut) const ;187 virtual std::vector<PseudoJet> exclusive_subjets(const PseudoJet &reference, const double & dcut) const FASTJET_OVERRIDE; 186 188 187 189 /// return the size of exclusive_subjets(...); still n ln n with same … … 191 193 /// an Error is thrown if this PseudoJet has no currently valid 192 194 /// associated ClusterSequence 193 virtual int n_exclusive_subjets(const PseudoJet &reference, const double & dcut) const ;195 virtual int n_exclusive_subjets(const PseudoJet &reference, const double & dcut) const FASTJET_OVERRIDE; 194 196 195 197 /// return the list of subjets obtained by unclustering the supplied … … 201 203 /// an Error is thrown if this PseudoJet has no currently valid 202 204 /// associated ClusterSequence 203 virtual std::vector<PseudoJet> exclusive_subjets_up_to (const PseudoJet &reference, int nsub) const ;205 virtual std::vector<PseudoJet> exclusive_subjets_up_to (const PseudoJet &reference, int nsub) const FASTJET_OVERRIDE; 204 206 205 207 /// return the dij that was present in the merging nsub+1 -> nsub … … 208 210 /// an Error is thrown if this PseudoJet has no currently valid 209 211 /// associated ClusterSequence 210 virtual double exclusive_subdmerge(const PseudoJet &reference, int nsub) const ;212 virtual double exclusive_subdmerge(const PseudoJet &reference, int nsub) const FASTJET_OVERRIDE; 211 213 212 214 /// return the maximum dij that occurred in the whole event at the … … 216 218 /// an Error is thrown if this PseudoJet has no currently valid 217 219 /// associated ClusterSequence 218 virtual double exclusive_subdmerge_max(const PseudoJet &reference, int nsub) const ;220 virtual double exclusive_subdmerge_max(const PseudoJet &reference, int nsub) const FASTJET_OVERRIDE; 219 221 220 222 … … 224 226 /// by convention, a jet associated with a ClusterSequence will have 225 227 /// its parents as pieces 226 virtual bool has_pieces(const PseudoJet &reference) const ;228 virtual bool has_pieces(const PseudoJet &reference) const FASTJET_OVERRIDE; 227 229 228 230 /// by convention, a jet associated with a ClusterSequence will have … … 235 237 /// sequence. If the cluster sequence has gone out of scope, an 236 238 /// error will be thrown 237 virtual std::vector<PseudoJet> pieces(const PseudoJet &reference) const ;239 virtual std::vector<PseudoJet> pieces(const PseudoJet &reference) const FASTJET_OVERRIDE; 238 240 239 241 … … 244 246 245 247 /// check if it has a defined area 246 virtual bool has_area() const ;248 virtual bool has_area() const FASTJET_OVERRIDE; 247 249 248 250 /// return the jet (scalar) area. 249 251 /// throws an Error if there is no support for area in the parent CS 250 virtual double area(const PseudoJet &reference) const ;252 virtual double area(const PseudoJet &reference) const FASTJET_OVERRIDE; 251 253 252 254 /// return the error (uncertainty) associated with the determination 253 255 /// of the area of this jet. 254 256 /// throws an Error if there is no support for area in the parent CS 255 virtual double area_error(const PseudoJet &reference) const ;257 virtual double area_error(const PseudoJet &reference) const FASTJET_OVERRIDE; 256 258 257 259 /// return the jet 4-vector area. 258 260 /// throws an Error if there is no support for area in the parent CS 259 virtual PseudoJet area_4vector(const PseudoJet &reference) const ;261 virtual PseudoJet area_4vector(const PseudoJet &reference) const FASTJET_OVERRIDE; 260 262 261 263 /// true if this jet is made exclusively of ghosts. 262 264 /// throws an Error if there is no support for area in the parent CS 263 virtual bool is_pure_ghost(const PseudoJet &reference) const ;265 virtual bool is_pure_ghost(const PseudoJet &reference) const FASTJET_OVERRIDE; 264 266 265 267 #endif // __FJCORE__ -
external/fastjet/ClusterSequenceVoronoiArea.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequenceVoronoiArea.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: ClusterSequenceVoronoiArea.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 65 65 66 66 /// return the area associated with the given jet 67 virtual inline double area(const PseudoJet & jet) const {67 virtual inline double area(const PseudoJet & jet) const FASTJET_OVERRIDE { 68 68 return _voronoi_area[jet.cluster_hist_index()];} 69 69 … … 72 72 /// made of sums of centres of all Voronoi cells in jet, each 73 73 /// contributing with a normalisation equal to the area of the cell 74 virtual inline PseudoJet area_4vector(const PseudoJet & jet) const {74 virtual inline PseudoJet area_4vector(const PseudoJet & jet) const FASTJET_OVERRIDE { 75 75 return _voronoi_area_4vector[jet.cluster_hist_index()];} 76 76 77 77 /// return the error of the area associated with the given jet 78 78 /// (0 by definition for a voronoi area) 79 virtual inline double area_error(const PseudoJet & /*jet*/) const {79 virtual inline double area_error(const PseudoJet & /*jet*/) const FASTJET_OVERRIDE { 80 80 return 0.0;} 81 81 -
external/fastjet/ClusterSequence_CP2DChan.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequence_CP2DChan.cc 3433 2014-07-23 08:17:03Z salam $2 // $Id: ClusterSequence_CP2DChan.cc 4045 2016-03-03 10:01:55Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 46 46 public: 47 47 int orig, mirror; 48 MirrorInfo(int a, int b) : orig(a), mirror(b) {} ;49 MirrorInfo() {};48 MirrorInfo(int a, int b) : orig(a), mirror(b) {} 49 MirrorInfo() : orig(0), mirror(0) {} // set dummy values to keep static code checkers happy 50 50 }; 51 51 -
external/fastjet/ClusterSequence_Delaunay.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClusterSequence_Delaunay.cc 3918 2015-07-03 14:19:13Z salam$2 // $Id: ClusterSequence_Delaunay.cc 4059 2016-03-03 20:49:48Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 69 69 70 70 // initialise our DNN structure with the set of points 71 auto_ptr<DynamicNearestNeighbours> DNN;72 bool verbose = false;71 SharedPtr<DynamicNearestNeighbours> DNN; 72 const bool verbose = false; 73 73 #ifndef DROP_CGAL // strategy = NlnN* are not supported if we drop CGAL... 74 74 bool ignore_nearest_is_mirror = (_Rparam < twopi); -
external/fastjet/CompositeJetStructure.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: CompositeJetStructure.hh 3652 2014-09-03 13:31:13Z salam$2 // $Id: CompositeJetStructure.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 64 64 65 65 /// description 66 virtual std::string description() const ;66 virtual std::string description() const FASTJET_OVERRIDE; 67 67 68 68 // things reimplemented from the base structure … … 70 70 /// true unless the jet has no pieces (see also the description of 71 71 /// constituents() below) 72 virtual bool has_constituents() const ;72 virtual bool has_constituents() const FASTJET_OVERRIDE; 73 73 74 74 /// return the constituents (i.e. the union of the constituents of each piece) … … 78 78 /// Note that as a consequence, a composite jet with no pieces will 79 79 /// have an empty vector as constituents 80 virtual std::vector<PseudoJet> constituents(const PseudoJet &jet) const ;80 virtual std::vector<PseudoJet> constituents(const PseudoJet &jet) const FASTJET_OVERRIDE; 81 81 82 82 //------------------------------------------------------------------- … … 84 84 //------------------------------------------------------------------- 85 85 /// true if it has pieces (always the case) 86 virtual bool has_pieces(const PseudoJet & /*jet*/) const {return true;}86 virtual bool has_pieces(const PseudoJet & /*jet*/) const FASTJET_OVERRIDE {return true;} 87 87 88 88 /// returns the pieces 89 virtual std::vector<PseudoJet> pieces(const PseudoJet &jet) const ;89 virtual std::vector<PseudoJet> pieces(const PseudoJet &jet) const FASTJET_OVERRIDE; 90 90 91 91 // area-related material … … 93 93 94 94 /// check if it has a well-defined area 95 virtual bool has_area() const ;95 virtual bool has_area() const FASTJET_OVERRIDE; 96 96 97 97 /// return the jet (scalar) area. 98 virtual double area(const PseudoJet &reference) const ;98 virtual double area(const PseudoJet &reference) const FASTJET_OVERRIDE; 99 99 100 100 /// return the error (uncertainty) associated with the determination … … 102 102 /// 103 103 /// Be conservative: return the sum of the errors 104 virtual double area_error(const PseudoJet &reference) const ;104 virtual double area_error(const PseudoJet &reference) const FASTJET_OVERRIDE; 105 105 106 106 /// return the jet 4-vector area. 107 virtual PseudoJet area_4vector(const PseudoJet &reference) const ;107 virtual PseudoJet area_4vector(const PseudoJet &reference) const FASTJET_OVERRIDE; 108 108 109 109 /// true if this jet is made exclusively of ghosts. 110 110 /// 111 111 /// In this case, it will be true if all pieces are pure ghost 112 virtual bool is_pure_ghost(const PseudoJet &reference) const ;112 virtual bool is_pure_ghost(const PseudoJet &reference) const FASTJET_OVERRIDE; 113 113 114 114 //unused: // allows one to modify the area information -
external/fastjet/DnnPlane.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: DnnPlane.cc 391 8 2015-07-03 14:19:13Z salam $2 // $Id: DnnPlane.cc 3917 2015-07-03 14:07:50Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/Error.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: Error.hh 380 9 2015-02-20 13:05:13Z soyez $5 // $Id: Error.hh 3807 2015-02-20 11:16:55Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 114 114 }; 115 115 116 117 116 FASTJET_END_NAMESPACE 118 117 -
external/fastjet/GhostedAreaSpec.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: GhostedAreaSpec.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: GhostedAreaSpec.hh 4074 2016-03-08 09:09:25Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 39 39 #include "fastjet/Selector.hh" 40 40 #include "fastjet/LimitedWarning.hh" 41 #include "fastjet/internal/deprecated.hh" 41 42 42 43 // … … 173 174 /// 174 175 /// FJ2 placement is now deprecated. 176 FASTJET_DEPRECATED_MSG("This is deprecated since we strongly recomment to use the new ghost placement instead") 175 177 void set_fj2_placement(bool val); 176 178 -
external/fastjet/JetDefinition.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: JetDefinition.cc 3677 2014-09-09 22:45:25Z soyez $2 // $Id: JetDefinition.cc 4074 2016-03-08 09:09:25Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 45 45 JetDefinition::JetDefinition(JetAlgorithm jet_algorithm_in, 46 46 double R_in, 47 RecombinationScheme recomb_scheme_in, 47 48 Strategy strategy_in, 48 RecombinationScheme recomb_scheme_in,49 49 int nparameters) : 50 50 _jet_algorithm(jet_algorithm_in), _Rparam(R_in), _strategy(strategy_in) { … … 185 185 186 186 // do not forget to delete the existing recombiner if needed 187 if (_shared_recombiner ()) _shared_recombiner.reset();187 if (_shared_recombiner) _shared_recombiner.reset(); 188 188 189 189 _recombiner = 0; -
external/fastjet/JetDefinition.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: JetDefinition.hh 3677 2014-09-09 22:45:25Z soyez $5 // $Id: JetDefinition.hh 4074 2016-03-08 09:09:25Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 35 35 #include "fastjet/internal/numconsts.hh" 36 36 #include "fastjet/PseudoJet.hh" 37 #include "fastjet/internal/deprecated.hh" 37 38 #include<string> 38 39 #include<memory> … … 268 269 RecombinationScheme recomb_scheme_in = E_scheme, 269 270 Strategy strategy_in = Best) { 270 *this = JetDefinition(jet_algorithm_in, R_in, strategy_in, recomb_scheme_in, 1);271 *this = JetDefinition(jet_algorithm_in, R_in, recomb_scheme_in, strategy_in, 1); 271 272 } 272 273 … … 277 278 Strategy strategy_in = Best) { 278 279 double dummyR = 0.0; 279 *this = JetDefinition(jet_algorithm_in, dummyR, strategy_in, recomb_scheme_in, 0);280 *this = JetDefinition(jet_algorithm_in, dummyR, recomb_scheme_in, strategy_in, 0); 280 281 } 281 282 … … 287 288 RecombinationScheme recomb_scheme_in = E_scheme, 288 289 Strategy strategy_in = Best) { 289 *this = JetDefinition(jet_algorithm_in, R_in, strategy_in, recomb_scheme_in, 2);290 *this = JetDefinition(jet_algorithm_in, R_in, recomb_scheme_in, strategy_in, 2); 290 291 set_extra_param(xtra_param_in); 291 292 } … … 344 345 _strategy = plugin_strategy; 345 346 _Rparam = _plugin->R(); 347 _extra_param = 0.0; // a dummy value to keep static code checkers happy 346 348 _jet_algorithm = plugin_algorithm; 347 349 set_recombination_scheme(E_scheme); 348 350 } 349 351 350 351 352 /// constructor to fully specify a jet-definition (together with 352 353 /// information about how algorithically to run it). 354 JetDefinition(JetAlgorithm jet_algorithm_in, 355 double R_in, 356 RecombinationScheme recomb_scheme_in, 357 Strategy strategy_in, 358 int nparameters_in); 359 360 /// constructor to fully specify a jet-definition (together with 361 /// information about how algorithically to run it). 353 362 /// 354 363 /// the ordering of arguments here is old and deprecated (except 355 364 /// as the common constructor for internal use) 365 FASTJET_DEPRECATED_MSG("This argument ordering is deprecated. Use JetDefinition(alg, R, strategy, scheme[, n_parameters]) instead") 356 366 JetDefinition(JetAlgorithm jet_algorithm_in, 357 367 double R_in, 358 368 Strategy strategy_in, 359 369 RecombinationScheme recomb_scheme_in = E_scheme, 360 int nparameters_in = 1); 370 int nparameters_in = 1){ 371 (*this) = JetDefinition(jet_algorithm_in,R_in,recomb_scheme_in,strategy_in,nparameters_in); 372 } 373 361 374 362 375 /// cluster the supplied particles and returns a vector of resulting … … 388 401 /// Recombiner *) may lead to memory corruption. 389 402 void set_recombiner(const Recombiner * recomb) { 390 if (_shared_recombiner ()) _shared_recombiner.reset(recomb);403 if (_shared_recombiner) _shared_recombiner.reset(recomb); 391 404 _recombiner = recomb; 392 405 _default_recombiner = DefaultRecombiner(external_scheme); … … 521 534 _recomb_scheme(recomb_scheme) {} 522 535 523 virtual std::string description() const ;536 virtual std::string description() const FASTJET_OVERRIDE; 524 537 525 538 /// recombine pa and pb and put result into pab 526 539 virtual void recombine(const PseudoJet & pa, const PseudoJet & pb, 527 PseudoJet & pab) const ;528 529 virtual void preprocess(PseudoJet & p) const ;540 PseudoJet & pab) const FASTJET_OVERRIDE; 541 542 virtual void preprocess(PseudoJet & p) const FASTJET_OVERRIDE; 530 543 531 544 /// return the index of the recombination scheme -
external/fastjet/LazyTiling25.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: LazyTiling25.cc 380 8 2015-02-20 11:24:53Z soyez $2 // $Id: LazyTiling25.cc 3807 2015-02-20 11:16:55Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 369 369 double dist = _distance_to_tile(jet, *near_tile) - tile_edge_security_margin; 370 370 // cout << " max info looked at tile " << *near_tile - &_tiles[0] 371 // 372 // 371 // << ", dist = " << dist << " " << (*near_tile)->max_NN_dist 372 // << " -> diff = " << dist-(*near_tile)->max_NN_dist << endl; 373 373 if (dist > (*near_tile)->max_NN_dist) continue; 374 374 … … 665 665 int n_near_tiles = 0; 666 666 667 // GS comment: 668 // 669 // At this stage, we have perforned the clustering in 670 // ClusterSequence and we need to update the NNs. The objects we 671 // deal with are jetA and oldB (the once that have been clustered) 672 // as well as jetB (the result of the clustering) 673 // 674 // There are two types of objects we need to update: 675 // - find jetB NN 676 // - update the NN of points which had jetA or jetB as their NN 677 // 678 // Wile we find jetB's NN, browsing relevant tiles near jetB, we 679 // also search for points which had jetA or jetB as their 680 // NN. These are tagged. Then we list the relevant tiles where we 681 // can potentially have points to update (i.e. points which had 682 // jetA and oldB as NN) in the yet untagged relevant tiles near 683 // jetA and oldB. 684 // 685 // DEBUG: 686 // if (jetB != NULL) { 687 // cout << "jetA = " << jetA->_jets_index << " (tile " << jetA->tile_index << "), " 688 // << "oldB = " << oldB._jets_index << " (tile " << oldB. tile_index << "), " 689 // << "jetB = " << jetB->_jets_index << " (tile " << jetB->tile_index << ")" << endl; 690 // } else { 691 // cout << "jetA = " << jetA->_jets_index << " (tile " << jetA->tile_index << ")" << endl; 692 // } 693 667 694 // Initialise jetB's NN distance as well as updating it for other 668 695 // particles. While doing so, examine whether jetA or old jetB was … … 679 706 bool relevant_for_near_tile = dist_to_tile <= (*near_tile)->max_NN_dist; 680 707 bool relevant = relevant_for_jetB || relevant_for_near_tile; 708 709 // cout << " Relevance of tile " << *near_tile - & _tiles[0] 710 // << " wrt jetB is " << relevant << endl; 711 681 712 if (! relevant) continue; 682 713 // now label this tile as having been considered (so that we … … 702 733 // and one new jet. 703 734 int n_done_tiles = n_near_tiles; 735 //cout << "Looking at relevant tiles to update for jetA" << endl; 704 736 _add_untagged_neighbours_to_tile_union_using_max_info(jetA, 705 737 tile_union, n_near_tiles); 706 738 if (jetB != NULL) { 739 // cout << "Looking at relevant tiles to update for oldB" << endl; 707 740 _add_untagged_neighbours_to_tile_union_using_max_info(&oldB, 708 741 tile_union,n_near_tiles); -
external/fastjet/LazyTiling9.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: LazyTiling9.cc 380 8 2015-02-20 11:24:53Z soyez $2 // $Id: LazyTiling9.cc 3807 2015-02-20 11:16:55Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/LazyTiling9Alt.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: LazyTiling9Alt.cc 380 8 2015-02-20 11:24:53Z soyez $2 // $Id: LazyTiling9Alt.cc 3807 2015-02-20 11:16:55Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/LazyTiling9SeparateGhosts.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: LazyTiling9SeparateGhosts.cc 380 8 2015-02-20 11:24:53Z soyez $2 // $Id: LazyTiling9SeparateGhosts.cc 3807 2015-02-20 11:16:55Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/NNH.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: NNH.hh 3433 2014-07-23 08:17:03Z salam$5 // $Id: NNH.hh 4034 2016-03-02 00:20:27Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 32 32 //FJENDHEADER 33 33 34 #include<fastjet/ClusterSequence.hh> 35 34 #include <fastjet/NNBase.hh> 36 35 37 36 FASTJET_BEGIN_NAMESPACE // defined in fastjet/internal/base.hh 38 39 /// @ingroup advanced_usage40 /// \class _NoInfo41 /// dummy class, used as a default template argument42 class _NoInfo {};43 44 /// @ingroup advanced_usage45 /// \class NNHInfo46 /// template that will help initialise a BJ with a PseudoJet and extra information47 template<class I> class NNHInfo {48 public:49 NNHInfo() : _info(NULL) {}50 NNHInfo(I * info) : _info(info) {}51 template<class NNBJ> void init_jet(NNBJ * briefjet, const fastjet::PseudoJet & jet, int index) { briefjet->init(jet, index, _info);}52 private:53 I * _info;54 };55 56 /// @ingroup advanced_usage57 /// Specialisation of NNHInfo for cases where there is no extra info58 template<> class NNHInfo<_NoInfo> {59 public:60 NNHInfo() {}61 NNHInfo(_NoInfo * ) {}62 template<class NNBJ> void init_jet(NNBJ * briefjet, const fastjet::PseudoJet & jet, int index) { briefjet->init(jet, index);}63 };64 65 37 66 38 //---------------------------------------------------------------------- … … 68 40 /// \class NNH 69 41 /// Help solve closest pair problems with generic interparticle and 70 /// beam distance. 71 /// 72 /// Class to help solve closest pair problems with generic interparticle 73 /// distances and a beam distance, using Anderberg's Nearest Neighbour 74 /// Heuristic. 75 /// 76 /// It is templated with a BJ (brief jet) class --- BJ should 77 /// basically cache the minimal amount of information that is needed 78 /// to efficiently calculate interparticle distances and particle-beam 79 /// distances. 80 /// 81 /// This class can be used with or without an extra "Information" template, 82 /// i.e. NNB<BJ> or NNH<BJ,I> 42 /// beam distance (generic case) 43 /// 44 /// (see NNBase.hh for an introductory description) 45 /// 46 /// This variant provides an implementation for any distance measure. 47 /// It is templated with a BJ (brief jet) classand can be used with or 48 /// without an extra "Information" template, i.e. NNH<BJ> or NNH<BJ,I> 83 49 /// 84 50 /// For the NNH<BJ> version of the class to function, BJ must provide … … 88 54 /// - double BJ::distance(const BJ * other_bj_jet); // distance between this and other_bj_jet 89 55 /// - double BJ::beam_distance() ; // distance to the beam 90 /// 56 /// 91 57 /// For the NNH<BJ,I> version to function, the BJ::init(...) member 92 58 /// must accept an extra argument … … 94 60 /// - void BJ::init(const PseudoJet & jet, I * info); // initialise with a PseudoJet + info 95 61 /// 96 /// where info might be a pointer to a class that contains, e.g., information97 /// about R, or other parameters of the jet algorithm62 /// NOTE: THE DISTANCE MUST BE SYMMETRIC I.E. SATISFY 63 /// a.distance(b) == b.distance(a) 98 64 /// 99 65 /// For an example of how the NNH<BJ> class is used, see the Jade (and … … 107 73 /// implementations. 108 74 /// 109 /// 110 /// Implementation note: this class derives from NNHInfo, which deals 111 /// with storing any global information that is needed during the clustering 112 113 template<class BJ, class I = _NoInfo> class NNH : public NNHInfo<I> { 75 template<class BJ, class I = _NoInfo> class NNH : public NNBase<I> { 114 76 public: 115 77 116 78 /// constructor with an initial set of jets (which will be assigned indices 117 79 /// 0 ... jets.size()-1 118 NNH(const std::vector<PseudoJet> & jets) {start(jets);} 119 NNH(const std::vector<PseudoJet> & jets, I * info) : NNHInfo<I>(info) {start(jets);} 120 80 NNH(const std::vector<PseudoJet> & jets) : NNBase<I>() {start(jets);} 81 NNH(const std::vector<PseudoJet> & jets, I * info) : NNBase<I>(info) {start(jets);} 82 83 // initialisation from a given list of particles 121 84 void start(const std::vector<PseudoJet> & jets); 122 85 -
external/fastjet/PseudoJet.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: PseudoJet.cc 3652 2014-09-03 13:31:13Z salam $2 // $Id: PseudoJet.cc 4100 2016-03-15 20:50:22Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 409 409 string PseudoJet::description() const{ 410 410 // the "default" case of a PJ which does not belong to any cluster sequence 411 if (!_structure ())411 if (!_structure) 412 412 return "standard PseudoJet (with no associated clustering information)"; 413 413 414 414 // for all the other cases, the description comes from the structure 415 return _structure ()->description();415 return _structure->description(); 416 416 } 417 417 … … 429 429 // ClusterSequence 430 430 bool PseudoJet::has_associated_cluster_sequence() const{ 431 return (_structure ()) && (_structure->has_associated_cluster_sequence());431 return (_structure) && (_structure->has_associated_cluster_sequence()); 432 432 } 433 433 … … 446 446 // ClusterSequence that is still valid 447 447 bool PseudoJet::has_valid_cluster_sequence() const{ 448 return (_structure ()) && (_structure->has_valid_cluster_sequence());448 return (_structure) && (_structure->has_valid_cluster_sequence()); 449 449 } 450 450 … … 467 467 468 468 //---------------------------------------------------------------------- 469 // return true if there is some stru sture associated with this PseudoJet469 // return true if there is some structure associated with this PseudoJet 470 470 bool PseudoJet::has_structure() const{ 471 return _structure();471 return bool(_structure); 472 472 } 473 473 … … 478 478 // return NULL if there is no associated structure 479 479 const PseudoJetStructureBase* PseudoJet::structure_ptr() const { 480 if (!_structure()) return NULL;481 return _structure ();480 //if (!_structure) return NULL; 481 return _structure.get(); 482 482 } 483 483 … … 493 493 // underlying structure. 494 494 PseudoJetStructureBase* PseudoJet::structure_non_const_ptr(){ 495 if (!_structure()) return NULL;496 return _structure ();495 //if (!_structure) return NULL; 496 return _structure.get(); 497 497 } 498 498 … … 503 503 // throw an error if there is no associated structure 504 504 const PseudoJetStructureBase* PseudoJet::validated_structure_ptr() const { 505 if (!_structure ())505 if (!_structure) 506 506 throw Error("Trying to access the structure of a PseudoJet which has no associated structure"); 507 return _structure ();507 return _structure.get(); 508 508 } 509 509 … … 573 573 // returns true if the PseudoJet has constituents 574 574 bool PseudoJet::has_constituents() const{ 575 return (_structure ()) && (_structure->has_constituents());575 return (_structure) && (_structure->has_constituents()); 576 576 } 577 577 … … 586 586 // returns true if the PseudoJet has support for exclusive subjets 587 587 bool PseudoJet::has_exclusive_subjets() const{ 588 return (_structure ()) && (_structure->has_exclusive_subjets());588 return (_structure) && (_structure->has_exclusive_subjets()); 589 589 } 590 590 … … 670 670 // ClusterSequence have no pieces and this methos will return false. 671 671 bool PseudoJet::has_pieces() const{ 672 return ((_structure ()) && (_structure->has_pieces(*this)));672 return ((_structure) && (_structure->has_pieces(*this))); 673 673 } 674 674 … … 766 766 767 767 768 769 //----------------------------------------------------------------------770 /// given a vector of values with a one-to-one correspondence with the771 /// vector of objects, sort objects into an order such that the772 /// associated values would be in increasing order773 template<class T> vector<T> objects_sorted_by_values(774 const vector<T> & objects,775 const vector<double> & values) {776 777 assert(objects.size() == values.size());778 779 // get a vector of indices780 vector<int> indices(values.size());781 for (size_t i = 0; i < indices.size(); i++) {indices[i] = i;}782 783 // sort the indices784 sort_indices(indices, values);785 786 // copy the objects787 vector<T> objects_sorted(objects.size());788 789 // place the objects in the correct order790 for (size_t i = 0; i < indices.size(); i++) {791 objects_sorted[i] = objects[indices[i]];792 }793 794 return objects_sorted;795 }796 797 768 //---------------------------------------------------------------------- 798 769 /// return a vector of jets sorted into decreasing kt2 -
external/fastjet/PseudoJet.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: PseudoJet.hh 3566 2014-08-11 15:36:34Z salam$2 // $Id: PseudoJet.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 437 437 /// retrieve a pointer to the (const) user information 438 438 const UserInfoBase * user_info_ptr() const{ 439 if (!_user_info()) return NULL; 439 // the line below is not needed since the next line would anyway 440 // return NULL in that case 441 //if (!_user_info) return NULL; 440 442 return _user_info.get(); 441 443 } … … 841 843 inline bool operator!=( const double val, const PseudoJet & a) {return !(a==val);} 842 844 845 /// returns the 4-vector dot product of a and b 843 846 inline double dot_product(const PseudoJet & a, const PseudoJet & b) { 844 847 return a.E()*b.E() - a.px()*b.px() - a.py()*b.py() - a.pz()*b.pz(); … … 880 883 /// touch the values vector in the process). 881 884 template<class T> std::vector<T> objects_sorted_by_values(const std::vector<T> & objects, 882 const std::vector<double> & values); 885 const std::vector<double> & values) { 886 //assert(objects.size() == values.size()); 887 if (objects.size() != values.size()){ 888 throw Error("fastjet::objects_sorted_by_values(...): the size of the 'objects' vector must match the size of the 'values' vector"); 889 } 890 891 // get a vector of indices 892 std::vector<int> indices(values.size()); 893 for (size_t i = 0; i < indices.size(); i++) {indices[i] = i;} 894 895 // sort the indices 896 sort_indices(indices, values); 897 898 // copy the objects 899 std::vector<T> objects_sorted(objects.size()); 900 901 // place the objects in the correct order 902 for (size_t i = 0; i < indices.size(); i++) { 903 objects_sorted[i] = objects[indices[i]]; 904 } 905 906 return objects_sorted; 907 } 883 908 884 909 /// \if internal_doc … … 970 995 template<typename TransformerType> 971 996 bool PseudoJet::has_structure_of() const{ 972 if (!_structure ()) return false;997 if (!_structure) return false; 973 998 974 999 return dynamic_cast<const typename TransformerType::StructureType *>(_structure.get()) != 0; … … 980 1005 template<typename TransformerType> 981 1006 const typename TransformerType::StructureType & PseudoJet::structure_of() const{ 982 if (!_structure ())1007 if (!_structure) 983 1008 throw Error("Trying to access the structure of a PseudoJet without an associated structure"); 984 1009 -
external/fastjet/RangeDefinition.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: RangeDefinition.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: RangeDefinition.hh 4074 2016-03-08 09:09:25Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 35 35 #include "fastjet/Error.hh" 36 36 #include "fastjet/LimitedWarning.hh" 37 #include "fastjet/internal/deprecated.hh" 37 38 #include<sstream> 38 39 #include<iostream> … … 51 52 public: 52 53 /// default constructor 54 FASTJET_DEPRECATED_MSG("RangeDefinition is deprecated since FastJet 3.0. Use the Selector mechanism instead") 53 55 RangeDefinition() { _warn_deprecated(); } 54 56 55 57 /// constructor for a range definition given by |y|<rapmax 58 FASTJET_DEPRECATED_MSG("RangeDefinition is deprecated since FastJet 3.0. Use the Selector mechanism instead") 56 59 RangeDefinition(double rapmax) { _warn_deprecated(); 57 60 assert ( rapmax > 0.0 ); -
external/fastjet/RectangularGrid.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: RectangularGrid.cc 377 1 2014-12-22 21:13:22Z salam$2 // $Id: RectangularGrid.cc 3773 2014-12-22 22:44:46Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/RectangularGrid.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: RectangularGrid.hh 3771 2014-12-22 21:13:22Z salam$5 // $Id: RectangularGrid.hh 4047 2016-03-03 13:21:49Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 118 118 RectangularGrid(); 119 119 120 virtual int n_tiles() const {return _ntotal;}120 virtual int n_tiles() const FASTJET_OVERRIDE {return _ntotal;} 121 121 122 virtual int n_good_tiles() const {return _ngood;}122 virtual int n_good_tiles() const FASTJET_OVERRIDE {return _ngood;} 123 123 124 124 // this was being kept inline, but it seems to make little 125 125 // difference whether it is or not (at least on Gavin's mac) 126 virtual int tile_index(const PseudoJet & p) const ;126 virtual int tile_index(const PseudoJet & p) const FASTJET_OVERRIDE; 127 127 128 128 /// returns whether a given tile is good 129 129 // tested in "issue" 2014-08-08-testing-rect-grid 130 virtual bool tile_is_good(int itile) const {return _tile_selector.worker() ? _is_good[itile] : true;} 130 virtual bool tile_is_good(int itile) const FASTJET_OVERRIDE { 131 return _tile_selector.worker() ? _is_good[itile] : true; 132 } 131 133 132 134 /// returns the area of tile itile. 133 virtual double tile_area(int /* itile */) const {return mean_tile_area();} 135 virtual double tile_area(int /* itile */) const FASTJET_OVERRIDE { 136 return mean_tile_area(); 137 } 134 138 135 139 /// returns the mean area of tiles. 136 virtual double mean_tile_area() const {return _dphi*_dy;};140 virtual double mean_tile_area() const FASTJET_OVERRIDE {return _dphi*_dy;}; 137 141 138 142 /// returns a textual description of the grid 139 virtual std::string description() const ;143 virtual std::string description() const FASTJET_OVERRIDE; 140 144 141 145 /// returns the minimum rapidity extent of the grid … … 149 153 150 154 /// returns true if the grid is in a suitably initialised state 151 virtual bool is_initialised() const {return _ntotal > 0;}155 virtual bool is_initialised() const FASTJET_OVERRIDE {return _ntotal > 0;} 152 156 153 157 private: -
external/fastjet/SharedPtr.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: SharedPtr.hh 3433 2014-07-23 08:17:03Z salam$5 // $Id: SharedPtr.hh 4051 2016-03-03 14:33:38Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 38 38 // for our SharedPtr simply to be derived from the STL TR1 one. 39 39 // #define __FASTJET_USETR1SHAREDPTR 40 41 #include "fastjet/internal/deprecated.hh" 40 42 41 43 #ifdef __FASTJET_USETR1SHAREDPTR … … 72 74 SharedPtr(const SharedPtr<T> & t) : std::tr1::shared_ptr<T>(t) {} 73 75 // for some reason operator() doesn't get inherited 76 #ifdef FASTJET_HAVE_EXPLICIT_FOR_OPERATORS 77 explicit 78 #endif 74 79 inline operator bool() const {return (this->get()!=NULL);} 75 80 /// return the pointer we're pointing to … … 211 216 } 212 217 213 /// return the pointer we're pointing to 218 /// return the pointer we're pointing to 219 /// 220 /// Since FastJet 3.2.0, this is depracated since it is no longer 221 /// part of std::shared_ptr<T>. Use SharedPtr<T>::get() instead 222 FASTJET_DEPRECATED_MSG("Use SharedPtr<T>::get() instead") 214 223 T* operator ()() const{ 215 224 if (_ptr==NULL) return NULL; … … 257 266 /// conversion to bool 258 267 /// This will allow you to use the indirection nicely 268 #ifdef FASTJET_HAVE_EXPLICIT_FOR_OPERATORS 269 explicit 270 #endif 259 271 inline operator bool() const{ 260 272 return (get()!=NULL); -
external/fastjet/TilingExtent.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: TilingExtent.cc 3433 2014-07-23 08:17:03Z salam$2 // $Id: TilingExtent.cc 4034 2016-03-02 00:20:27Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 41 41 _determine_rapidity_extent(cs.jets()); 42 42 } 43 43 44 TilingExtent::TilingExtent(const vector<PseudoJet> &particles) { 45 _determine_rapidity_extent(particles); 46 } 47 44 48 void TilingExtent::_determine_rapidity_extent(const vector<PseudoJet> & particles) { 45 49 // have a binning of rapidity that goes from -nrap to nrap -
external/fastjet/VERSION
rd091310 r1d208a2 1 3. 1.31 3.2.1 -
external/fastjet/WrappedStructure.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: WrappedStructure.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: WrappedStructure.hh 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 57 57 WrappedStructure(const SharedPtr<PseudoJetStructureBase> & to_be_shared) 58 58 : _structure(to_be_shared){ 59 if (!_structure ())59 if (!_structure) 60 60 throw Error("Trying to construct a wrapped structure around an empty (NULL) structure"); 61 61 } … … 65 65 66 66 /// description 67 virtual std::string description() const {67 virtual std::string description() const FASTJET_OVERRIDE{ 68 68 return "PseudoJet wrapping the structure ("+_structure->description()+")"; 69 69 } … … 76 76 //------------------------------------------------------------- 77 77 /// returns true if there is an associated ClusterSequence 78 virtual bool has_associated_cluster_sequence() const {78 virtual bool has_associated_cluster_sequence() const FASTJET_OVERRIDE { 79 79 return _structure->has_associated_cluster_sequence(); 80 80 } … … 82 82 /// get a (const) pointer to the parent ClusterSequence (NULL if 83 83 /// inexistent) 84 virtual const ClusterSequence* associated_cluster_sequence() const {84 virtual const ClusterSequence* associated_cluster_sequence() const FASTJET_OVERRIDE{ 85 85 return _structure->associated_cluster_sequence(); 86 86 } … … 88 88 /// returns true if this PseudoJet has an associated and still 89 89 /// valid ClusterSequence. 90 virtual bool has_valid_cluster_sequence() const {90 virtual bool has_valid_cluster_sequence() const FASTJET_OVERRIDE { 91 91 return _structure->has_valid_cluster_sequence(); 92 92 } … … 94 94 /// if the jet has a valid associated cluster sequence then return a 95 95 /// pointer to it; otherwise throw an error 96 virtual const ClusterSequence * validated_cs() const {96 virtual const ClusterSequence * validated_cs() const FASTJET_OVERRIDE{ 97 97 return _structure->validated_cs(); 98 98 } … … 100 100 /// if the jet has valid area information then return a pointer to 101 101 /// the associated ClusterSequenceAreaBase object; otherwise throw an error 102 virtual const ClusterSequenceAreaBase * validated_csab() const {102 virtual const ClusterSequenceAreaBase * validated_csab() const FASTJET_OVERRIDE{ 103 103 return _structure->validated_csab(); 104 104 } … … 120 120 /// 121 121 /// By default, throws an Error 122 virtual bool has_partner(const PseudoJet &reference, PseudoJet &partner) const {122 virtual bool has_partner(const PseudoJet &reference, PseudoJet &partner) const FASTJET_OVERRIDE{ 123 123 return _structure->has_partner(reference, partner); 124 124 } … … 129 129 /// 130 130 /// By default, throws an Error 131 virtual bool has_child(const PseudoJet &reference, PseudoJet &child) const {131 virtual bool has_child(const PseudoJet &reference, PseudoJet &child) const FASTJET_OVERRIDE{ 132 132 return _structure->has_child(reference, child); 133 133 } … … 138 138 /// 139 139 /// By default, throws an Error 140 virtual bool has_parents(const PseudoJet &reference, PseudoJet &parent1, PseudoJet &parent2) const{ 140 virtual bool has_parents(const PseudoJet &reference, 141 PseudoJet &parent1, PseudoJet &parent2) const FASTJET_OVERRIDE{ 141 142 return _structure->has_parents(reference, parent1, parent2); 142 143 } … … 146 147 /// 147 148 /// By default, throws an Error 148 virtual bool object_in_jet(const PseudoJet &reference, const PseudoJet &jet) const{ 149 virtual bool object_in_jet(const PseudoJet &reference, 150 const PseudoJet &jet) const FASTJET_OVERRIDE{ 149 151 return _structure->object_in_jet(reference, jet); 150 152 } … … 154 156 /// 155 157 /// false by default 156 virtual bool has_constituents() const {158 virtual bool has_constituents() const FASTJET_OVERRIDE{ 157 159 return _structure->has_constituents(); 158 160 } … … 161 163 /// 162 164 /// By default, throws an Error 163 virtual std::vector<PseudoJet> constituents(const PseudoJet &reference) const {165 virtual std::vector<PseudoJet> constituents(const PseudoJet &reference) const FASTJET_OVERRIDE{ 164 166 return _structure->constituents(reference); 165 167 } 166 168 167 169 /// return true if the structure supports exclusive_subjets. 168 virtual bool has_exclusive_subjets() const {170 virtual bool has_exclusive_subjets() const FASTJET_OVERRIDE{ 169 171 return _structure->has_exclusive_subjets(); 170 172 } … … 180 182 /// 181 183 /// By default, throws an Error 182 virtual std::vector<PseudoJet> exclusive_subjets(const PseudoJet &reference, const double & dcut) const{ 184 virtual std::vector<PseudoJet> exclusive_subjets(const PseudoJet &reference, 185 const double & dcut) const FASTJET_OVERRIDE{ 183 186 return _structure->exclusive_subjets(reference, dcut); 184 187 } … … 189 192 /// 190 193 /// By default, throws an Error 191 virtual int n_exclusive_subjets(const PseudoJet &reference, const double & dcut) const{ 194 virtual int n_exclusive_subjets(const PseudoJet &reference, 195 const double & dcut) const FASTJET_OVERRIDE{ 192 196 return _structure->n_exclusive_subjets(reference, dcut); 193 197 } … … 198 202 /// 199 203 /// By default, throws an Error 200 virtual std::vector<PseudoJet> exclusive_subjets_up_to (const PseudoJet &reference, int nsub) const{ 204 virtual std::vector<PseudoJet> exclusive_subjets_up_to (const PseudoJet &reference, 205 int nsub) const FASTJET_OVERRIDE{ 201 206 return _structure->exclusive_subjets_up_to (reference, nsub); 202 207 } … … 206 211 /// 207 212 /// By default, throws an Error 208 virtual double exclusive_subdmerge(const PseudoJet &reference, int nsub) const {213 virtual double exclusive_subdmerge(const PseudoJet &reference, int nsub) const FASTJET_OVERRIDE{ 209 214 return _structure->exclusive_subdmerge(reference, nsub); 210 215 } … … 215 220 /// 216 221 /// By default, throws an Error 217 virtual double exclusive_subdmerge_max(const PseudoJet &reference, int nsub) const {222 virtual double exclusive_subdmerge_max(const PseudoJet &reference, int nsub) const FASTJET_OVERRIDE{ 218 223 return _structure->exclusive_subdmerge_max(reference, nsub); 219 224 } … … 226 231 /// 227 232 /// false by default 228 virtual bool has_pieces(const PseudoJet &reference) const {233 virtual bool has_pieces(const PseudoJet &reference) const FASTJET_OVERRIDE { 229 234 return _structure->has_pieces(reference); 230 235 } … … 233 238 /// 234 239 /// By default, throws an Error 235 virtual std::vector<PseudoJet> pieces(const PseudoJet &reference) const {240 virtual std::vector<PseudoJet> pieces(const PseudoJet &reference) const FASTJET_OVERRIDE { 236 241 return _structure->pieces(reference); 237 242 } … … 244 249 /// 245 250 /// false by default 246 virtual bool has_area() const {251 virtual bool has_area() const FASTJET_OVERRIDE { 247 252 return _structure->has_area(); 248 253 } … … 251 256 /// 252 257 /// By default, throws an Error 253 virtual double area(const PseudoJet &reference) const {258 virtual double area(const PseudoJet &reference) const FASTJET_OVERRIDE{ 254 259 return _structure->area(reference); 255 260 } … … 259 264 /// 260 265 /// By default, throws an Error 261 virtual double area_error(const PseudoJet &reference) const {266 virtual double area_error(const PseudoJet &reference) const FASTJET_OVERRIDE{ 262 267 return _structure->area_error(reference); 263 268 } … … 266 271 /// 267 272 /// By default, throws an Error 268 virtual PseudoJet area_4vector(const PseudoJet &reference) const {273 virtual PseudoJet area_4vector(const PseudoJet &reference) const FASTJET_OVERRIDE{ 269 274 return _structure->area_4vector(reference); 270 275 } … … 273 278 /// 274 279 /// By default, throws an Error 275 virtual bool is_pure_ghost(const PseudoJet &reference) const {280 virtual bool is_pure_ghost(const PseudoJet &reference) const FASTJET_OVERRIDE{ 276 281 return _structure->is_pure_ghost(reference); 277 282 } -
external/fastjet/config_auto.h
rd091310 r1d208a2 64 64 #endif 65 65 66 /* defined if C++11 features have been enabled */ 67 /* #undef HAVE_CXX11_FEATURES */ 66 /* compile the deprecated parts of the interface using auto-ptr */ 67 #ifndef FASTJET_HAVE_AUTO_PTR_INTERFACE 68 #define FASTJET_HAVE_AUTO_PTR_INTERFACE /**/ 69 #endif 70 71 /* compiler supports c++14 deprecated keyword */ 72 /* #undef HAVE_CXX14_DEPRECATED */ 68 73 69 74 /* defined if demangling is enabled at configure time and is supported through … … 81 86 #endif 82 87 88 /* compiler supports the "explicit" keyword for operators */ 89 /* #undef HAVE_EXPLICIT_FOR_OPERATORS */ 90 91 /* compiler supports GNU c++ deprecated attribute */ 92 #ifndef FASTJET_HAVE_GNUCXX_DEPRECATED 93 #define FASTJET_HAVE_GNUCXX_DEPRECATED /**/ 94 #endif 95 83 96 /* Define to 1 if you have the <inttypes.h> header file. */ 84 97 #ifndef FASTJET_HAVE_INTTYPES_H … … 96 109 #endif 97 110 111 /* compiler supports the "override" keyword */ 112 /* #undef HAVE_OVERRIDE */ 113 98 114 /* Define to 1 if you have the <stdint.h> header file. */ 99 115 #ifndef FASTJET_HAVE_STDINT_H … … 131 147 #endif 132 148 133 /* Define to the sub-directory in which libtool stores uninstalled libraries. 134 */ 149 /* Define to the sub-directory where libtool stores uninstalled libraries. */ 135 150 #ifndef FASTJET_LT_OBJDIR 136 151 #define FASTJET_LT_OBJDIR ".libs/" … … 154 169 /* Define to the full name and version of this package. */ 155 170 #ifndef FASTJET_PACKAGE_STRING 156 #define FASTJET_PACKAGE_STRING "FastJet 3. 1.3"171 #define FASTJET_PACKAGE_STRING "FastJet 3.2.1" 157 172 #endif 158 173 … … 162 177 #endif 163 178 179 /* Define to the home page for this package. */ 180 #ifndef FASTJET_PACKAGE_URL 181 #define FASTJET_PACKAGE_URL "" 182 #endif 183 164 184 /* Define to the version of this package. */ 165 185 #ifndef FASTJET_PACKAGE_VERSION 166 #define FASTJET_PACKAGE_VERSION "3. 1.3"186 #define FASTJET_PACKAGE_VERSION "3.2.1" 167 187 #endif 168 188 … … 174 194 /* Version number of package */ 175 195 #ifndef FASTJET_VERSION 176 #define FASTJET_VERSION "3. 1.3"196 #define FASTJET_VERSION "3.2.1" 177 197 #endif 178 198 … … 184 204 /* Minor version of this package */ 185 205 #ifndef FASTJET_VERSION_MINOR 186 #define FASTJET_VERSION_MINOR 1206 #define FASTJET_VERSION_MINOR 2 187 207 #endif 188 208 189 209 /* Version of the package under the form XYYZZ (instead of X.Y.Z) */ 190 210 #ifndef FASTJET_VERSION_NUMBER 191 #define FASTJET_VERSION_NUMBER 30 103211 #define FASTJET_VERSION_NUMBER 30201 192 212 #endif 193 213 194 214 /* Patch version of this package */ 195 215 #ifndef FASTJET_VERSION_PATCHLEVEL 196 #define FASTJET_VERSION_PATCHLEVEL 3216 #define FASTJET_VERSION_PATCHLEVEL 1 197 217 #endif 198 218 -
external/fastjet/config_raw.h
rd091310 r1d208a2 38 38 #define ENABLE_PLUGIN_TRACKJET /**/ 39 39 40 /* defined if C++11 features have been enabled */ 41 /* #undef HAVE_CXX11_FEATURES */ 40 /* compile the deprecated parts of the interface using auto-ptr */ 41 #define HAVE_AUTO_PTR_INTERFACE /**/ 42 43 /* compiler supports c++14 deprecated keyword */ 44 /* #undef HAVE_CXX14_DEPRECATED */ 42 45 43 46 /* defined if demangling is enabled at configure time and is supported through … … 51 54 #define HAVE_EXECINFO_H 1 52 55 56 /* compiler supports the "explicit" keyword for operators */ 57 /* #undef HAVE_EXPLICIT_FOR_OPERATORS */ 58 59 /* compiler supports GNU c++ deprecated attribute */ 60 #define HAVE_GNUCXX_DEPRECATED /**/ 61 53 62 /* Define to 1 if you have the <inttypes.h> header file. */ 54 63 #define HAVE_INTTYPES_H 1 … … 59 68 /* Define to 1 if you have the <memory.h> header file. */ 60 69 #define HAVE_MEMORY_H 1 70 71 /* compiler supports the "override" keyword */ 72 /* #undef HAVE_OVERRIDE */ 61 73 62 74 /* Define to 1 if you have the <stdint.h> header file. */ … … 81 93 #define HAVE_UNISTD_H 1 82 94 83 /* Define to the sub-directory in which libtool stores uninstalled libraries. 84 */ 95 /* Define to the sub-directory where libtool stores uninstalled libraries. */ 85 96 #define LT_OBJDIR ".libs/" 86 97 … … 95 106 96 107 /* Define to the full name and version of this package. */ 97 #define PACKAGE_STRING "FastJet 3. 1.3"108 #define PACKAGE_STRING "FastJet 3.2.1" 98 109 99 110 /* Define to the one symbol short name of this package. */ 100 111 #define PACKAGE_TARNAME "fastjet" 101 112 113 /* Define to the home page for this package. */ 114 #define PACKAGE_URL "" 115 102 116 /* Define to the version of this package. */ 103 #define PACKAGE_VERSION "3. 1.3"117 #define PACKAGE_VERSION "3.2.1" 104 118 105 119 /* Define to 1 if you have the ANSI C header files. */ … … 107 121 108 122 /* Version number of package */ 109 #define VERSION "3. 1.3"123 #define VERSION "3.2.1" 110 124 111 125 /* Major version of this package */ … … 113 127 114 128 /* Minor version of this package */ 115 #define VERSION_MINOR 1129 #define VERSION_MINOR 2 116 130 117 131 /* Version of the package under the form XYYZZ (instead of X.Y.Z) */ 118 #define VERSION_NUMBER 30 103132 #define VERSION_NUMBER 30201 119 133 120 134 /* Patch version of this package */ 121 #define VERSION_PATCHLEVEL 3135 #define VERSION_PATCHLEVEL 1 122 136 123 137 /* Pre-release version of this package */ -
external/fastjet/config_win.h
rd091310 r1d208a2 1 #define FASTJET_PACKAGE_STRING "FastJet 3.1.3" 2 #define FASTJET_PACKAGE_VERSION "3.1.3" 3 #define FASTJET_VERSION "3.1.3" 4 #define FASTJET_VERSION_MAJOR 3.1.3 5 #define FASTJET_VERSION_MINOR 3.1.3 6 #define FASTJET_VERSION_PATCHLEVEL 3.1.3 7 #define FASTJET_VERSION_PRERELEASE "3.1.3" 8 #define FASTJET_VERSION_NUMBER 00000 1 #define FASTJET_PACKAGE_STRING "FastJet 3.2.1" 2 #define FASTJET_PACKAGE_VERSION "3.2.1" 3 #define FASTJET_VERSION "3.2.1" 4 #define FASTJET_VERSION_MAJOR 3 5 #define FASTJET_VERSION_MINOR 2 6 #define FASTJET_VERSION_PATCHLEVEL 1 7 #define FASTJET_VERSION_NUMBER 30201 9 8 10 9 /* The ATLASCone plugin is disabled by default*/ -
external/fastjet/contribs/Nsubjettiness/ChangeLog
rd091310 r1d208a2 1 2016-06-08 <jthaler> 2 Fixed bug in MeasureDefinition.cc where axes were not completely defined, 3 leading to problems with multi-pass axes 4 2016-04-04 <jthaler> 5 Fixed Njettiness.cc to give value of _current_tau_components even if less 6 than N constituents 7 Delete extraneous code in example_advanced_usage.cc 8 2016-03-29 <jthaler> 9 Update for FJ 3.2.0 to deal with SharedPtr () deprecation 1 10 2015-09-28 <jthaler> 2 11 Updated NEWS for 2.2.1 release. -
external/fastjet/contribs/Nsubjettiness/MeasureDefinition.cc
rd091310 r1d208a2 5 5 // Jesse Thaler, Ken Van Tilburg, Christopher K. Vermilion, and TJ Wilkason 6 6 // 7 // $Id: MeasureDefinition.cc 819 2015-06-12 21:23:24Z jthaler $7 // $Id: MeasureDefinition.cc 946 2016-06-14 19:11:27Z jthaler $ 8 8 //---------------------------------------------------------------------- 9 9 // This file is part of FastJet contrib. … … 524 524 old_axes[k].set_rap( seedAxes[k].rap() ); 525 525 old_axes[k].set_phi( seedAxes[k].phi() ); 526 old_axes[k].set_mom( seedAxes[k].modp() ); 526 527 } 527 528 -
external/fastjet/contribs/Nsubjettiness/NEWS
rd091310 r1d208a2 32 32 N-jettiness as a jet finder using the new ConicalGeometric measure. 33 33 34 -- 2.2.4: (Jun 14, 2016) Fixed bug where multi-pass minimization could yield 35 pathological axes (thanks Gregory Soyez) 36 -- 2.2.3: (Apr 4, 2016) Fixed bug where a jet with fewer than N constituents 37 could give random value for tau_N (thanks Nathan Hartland) 38 -- 2.2.2: (Mar 29, 2016) Updating SharedPtr interface for FJ 3.2 34 39 -- 2.2.1: (Sept 28, 2015) Fix of small Makefile bug 35 40 -- 2.2.0: (Sept 7, 2015) Inclusion of the XCone jet algorithm, as well as a -
external/fastjet/contribs/Nsubjettiness/Njettiness.cc
rd091310 r1d208a2 5 5 // Jesse Thaler, Ken Van Tilburg, Christopher K. Vermilion, and TJ Wilkason 6 6 // 7 // $Id: Njettiness.cc 821 2015-06-15 18:50:53Z jthaler $7 // $Id: Njettiness.cc 933 2016-04-04 22:23:32Z jthaler $ 8 8 //---------------------------------------------------------------------- 9 9 // This file is part of FastJet contrib. … … 46 46 // setAxes for Manual mode 47 47 void Njettiness::setAxes(const std::vector<fastjet::PseudoJet> & myAxes) { 48 if (_axes_def ()->needsManualAxes()) {48 if (_axes_def->needsManualAxes()) { 49 49 _currentAxes = myAxes; 50 50 } else { … … 59 59 _currentAxes = inputJets; 60 60 _currentAxes.resize(n_jets,fastjet::PseudoJet(0.0,0.0,0.0,0.0)); 61 _current_tau_components = TauComponents(); 61 62 // Put in empty tau components 63 std::vector<double> dummy_jet_pieces; 64 _current_tau_components = TauComponents(UNDEFINED_SHAPE, 65 dummy_jet_pieces, 66 0.0, 67 1.0, 68 _currentAxes, 69 _currentAxes 70 ); 62 71 _seedAxes = _currentAxes; 63 72 _currentPartition = TauPartition(n_jets); // empty partition 64 73 } else { 65 assert(_axes_def ()); // this should never fail.74 assert(_axes_def); // this should never fail. 66 75 67 if (_axes_def ()->needsManualAxes()) { // if manual mode76 if (_axes_def->needsManualAxes()) { // if manual mode 68 77 // take current axes as seeds 69 78 _seedAxes = _currentAxes; 70 79 71 80 // refine axes if requested 72 _currentAxes = _axes_def->get_refined_axes(n_jets,inputJets,_seedAxes, _measure_def ());81 _currentAxes = _axes_def->get_refined_axes(n_jets,inputJets,_seedAxes, _measure_def.get()); 73 82 } else { // non-manual axes 74 83 75 84 //set starting point for minimization 76 _seedAxes = _axes_def->get_starting_axes(n_jets,inputJets,_measure_def ());85 _seedAxes = _axes_def->get_starting_axes(n_jets,inputJets,_measure_def.get()); 77 86 78 87 // refine axes as needed 79 _currentAxes = _axes_def->get_refined_axes(n_jets,inputJets,_seedAxes, _measure_def ());88 _currentAxes = _axes_def->get_refined_axes(n_jets,inputJets,_seedAxes, _measure_def.get()); 80 89 81 90 // NOTE: The above two function calls are combined in "AxesDefinition::get_axes" -
external/fastjet/contribs/Nsubjettiness/VERSION
rd091310 r1d208a2 1 2.2. 11 2.2.4 -
external/fastjet/internal/ClosestPair2D.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClosestPair2D.hh 3433 2014-07-23 08:17:03Z salam$2 // $Id: ClosestPair2D.hh 4059 2016-03-03 20:49:48Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 38 38 #include "fastjet/internal/SearchTree.hh" 39 39 #include "fastjet/internal/MinHeap.hh" 40 #include "fastjet/SharedPtr.hh" 40 41 41 42 FASTJET_BEGIN_NAMESPACE // defined in fastjet/internal/base.hh … … 134 135 135 136 136 triplet< std::auto_ptr<Tree> > _trees;137 std::auto_ptr<MinHeap>_heap;137 triplet<SharedPtr<Tree> > _trees; 138 SharedPtr<MinHeap> _heap; 138 139 std::vector<Point> _points; 139 140 std::stack<Point *> _available_points; -
external/fastjet/internal/ClosestPair2DBase.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: ClosestPair2DBase.hh 3433 2014-07-23 08:17:03Z salam $2 // $Id: ClosestPair2DBase.hh 4049 2016-03-03 13:45:47Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 48 48 double x, y; 49 49 50 Coord2D() {};50 Coord2D() : x(0.0), y(0.0) {}; 51 51 52 52 Coord2D(double a, double b): x(a), y(b) {}; -
external/fastjet/internal/DnnPlane.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: DnnPlane.hh 391 8 2015-07-03 14:19:13Z salam $2 // $Id: DnnPlane.hh 3917 2015-07-03 14:07:50Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/internal/LazyTiling9Alt.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: LazyTiling9Alt.hh 380 8 2015-02-20 11:24:53Z soyez $5 // $Id: LazyTiling9Alt.hh 3807 2015-02-20 11:16:55Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/internal/TilingExtent.hh
rd091310 r1d208a2 5 5 6 6 //FJSTARTHEADER 7 // $Id: TilingExtent.hh 3433 2014-07-23 08:17:03Z salam$7 // $Id: TilingExtent.hh 4034 2016-03-02 00:20:27Z soyez $ 8 8 // 9 9 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 46 46 TilingExtent(ClusterSequence & cs); 47 47 48 /// constructor that takes a list of PseudoJets 49 TilingExtent(const std::vector<PseudoJet> &particles); 50 48 51 /// returns the suggested minimum rapidity for the tiling 49 52 double minrap() const {return _minrap;} -
external/fastjet/internal/base.hh
rd091310 r1d208a2 1 1 2 2 //FJSTARTHEADER 3 // $Id: base.hh 3433 2014-07-23 08:17:03Z salam$3 // $Id: base.hh 4047 2016-03-03 13:21:49Z soyez $ 4 4 // 5 5 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 33 33 #define __FASTJET_FASTJET_BASE_HH__ 34 34 35 #include "fastjet/config.h" 36 35 37 /// \namespace fastjet 36 38 /// the FastJet namespace … … 43 45 #define FASTJET_END_NAMESPACE } 44 46 47 // define a macro to mark virtual function in derived classes as 48 // overriding the base-class definition 49 #ifdef FASTJET_HAVE_OVERRIDE 50 #define FASTJET_OVERRIDE override 51 #else 52 #define FASTJET_OVERRIDE 53 #endif 54 45 55 #endif // __FASTJET_FASTJET_BASE_HH__ -
external/fastjet/plugins/Jade/JadePlugin.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: JadePlugin.cc 3433 2014-07-23 08:17:03Z salam $2 // $Id: JadePlugin.cc 4063 2016-03-04 10:31:40Z salam $ 3 3 // 4 4 // Copyright (c) 2007-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 35 35 //#include "fastjet/internal/ClusterSequence_N2.icc" 36 36 #include "fastjet/NNH.hh" 37 #include "fastjet/NNFJN2Plain.hh" 37 38 38 39 // other stuff … … 51 52 //---------------------------------------------------------------------- 52 53 /// class to help run a JADE algorithm 54 /// 55 /// This class works both with NNH and NNFJN2Plain clustering 56 /// helpers. They both use the same init(...) call, but for the 57 /// clustering: 58 /// 59 /// - NNH uses distance(...) and beam_distance() 60 /// - NNFJPlainN2 uses geometrical_distance(...), momentum_factor() 61 /// and geometrical_beam_distance() 62 /// 63 /// For NNFJPlainN2 the 2 E_i E_j (1-cos theta_{ij}) factor 64 /// gets broken up into 65 /// 66 /// sqrt(2)*min(E_i,E_j) * [sqrt(2)*max(E_i,E_j) (1 - cos \theta_{ij})] 67 /// 68 /// The second factor is what we call the "geometrical_distance" even 69 /// though it isn't actually purely geometrical. But the fact that it 70 /// gets multiplied by min(E_i,E_j) to get the full distance is 71 /// sufficient for the validity of the FJ lemma, allowing for the use 72 /// of NNFJN2Plain. 53 73 class JadeBriefJet { 54 74 public: … … 69 89 } 70 90 91 double geometrical_distance(const JadeBriefJet * jet) const { 92 double dij = 1 - nx*jet->nx 93 - ny*jet->ny 94 - nz*jet->nz; 95 dij *= max(rt2E,jet->rt2E); 96 return dij; 97 } 98 99 double momentum_factor() const { 100 return rt2E; 101 } 102 71 103 double beam_distance() const { 72 104 return numeric_limits<double>::max(); 73 105 } 74 106 107 double geometrical_beam_distance() const { 108 // get a number that is almost the same as max(), just a little 109 // smaller so as to ensure that when we divide it by rt2E and then 110 // multiply it again, we won't get an overflow 111 const double almost_max = numeric_limits<double>::max() * (1 - 1e-13); 112 return almost_max / rt2E; 113 } 114 75 115 private: 76 116 double rt2E, nx, ny, nz; … … 82 122 ostringstream desc; 83 123 desc << "e+e- JADE algorithm plugin"; 124 switch(_strategy) { 125 case strategy_NNH: 126 desc << ", using NNH strategy"; break; 127 case strategy_NNFJN2Plain: 128 desc << ", using NNFJN2Plain strategy"; break; 129 default: 130 throw Error("Unrecognized strategy in JadePlugin"); 131 } 132 84 133 return desc.str(); 85 134 } 86 135 87 //---------------------------------------------------------------------- 88 void JadePlugin::run_clustering(ClusterSequence & cs) const { 136 // //---------------------------------------------------------------------- 137 // void JadePlugin::run_clustering(ClusterSequence & cs) const { 138 // int njets = cs.jets().size(); 139 // 140 // //SharedPtr<NNBase<> > nn; 141 // NNBase<> * nn; 142 // switch(_strategy) { 143 // case strategy_NNH: 144 // //nn.reset(new NNH<JadeBriefJet>(cs.jets())); 145 // nn = new NNH<JadeBriefJet>(cs.jets()); 146 // break; 147 // case strategy_NNFJN2Plain: 148 // //nn.reset(new NNFJN2Plain<JadeBriefJet>(cs.jets())); 149 // nn = new NNFJN2Plain<JadeBriefJet>(cs.jets()); 150 // break; 151 // default: 152 // throw Error("Unrecognized strategy in JadePlugin"); 153 // } 154 // //NNH<JadeBriefJet> nnh(cs.jets()); 155 // //NNFJN2Plain<JadeBriefJet> nnh(cs.jets()); 156 // 157 // // if testing against Hoeth's implementation, need to rescale the 158 // // dij by Q^2. 159 // //double Q2 = cs.Q2(); 160 // 161 // while (njets > 0) { 162 // int i, j, k; 163 // double dij = nn->dij_min(i, j); 164 // 165 // if (j >= 0) { 166 // cs.plugin_record_ij_recombination(i, j, dij, k); 167 // nn->merge_jets(i, j, cs.jets()[k], k); 168 // } else { 169 // double diB = cs.jets()[i].E()*cs.jets()[i].E(); // get new diB 170 // cs.plugin_record_iB_recombination(i, diB); 171 // nn->remove_jet(i); 172 // } 173 // njets--; 174 // } 175 // delete nn; 176 // } 177 178 179 template<class N> void JadePlugin::_actual_run_clustering(ClusterSequence & cs) const { 180 89 181 int njets = cs.jets().size(); 90 NNH<JadeBriefJet> nnh(cs.jets()); 182 183 N nn(cs.jets()); 91 184 92 185 // if testing against Hoeth's implementation, need to rescale the … … 96 189 while (njets > 0) { 97 190 int i, j, k; 98 double dij = nn h.dij_min(i, j);191 double dij = nn.dij_min(i, j); 99 192 100 193 if (j >= 0) { 101 194 cs.plugin_record_ij_recombination(i, j, dij, k); 102 nn h.merge_jets(i, j, cs.jets()[k], k);195 nn.merge_jets(i, j, cs.jets()[k], k); 103 196 } else { 104 197 double diB = cs.jets()[i].E()*cs.jets()[i].E(); // get new diB 105 198 cs.plugin_record_iB_recombination(i, diB); 106 nn h.remove_jet(i);199 nn.remove_jet(i); 107 200 } 108 201 njets--; 109 202 } 203 110 204 } 111 205 206 //---------------------------------------------------------------------- 207 void JadePlugin::run_clustering(ClusterSequence & cs) const { 208 209 switch(_strategy) { 210 case strategy_NNH: 211 _actual_run_clustering<NNH<JadeBriefJet> >(cs); 212 break; 213 case strategy_NNFJN2Plain: 214 _actual_run_clustering<NNFJN2Plain<JadeBriefJet> >(cs); 215 break; 216 default: 217 throw Error("Unrecognized strategy in JadePlugin"); 218 } 219 } 220 221 112 222 FASTJET_END_NAMESPACE // defined in fastjet/internal/base.hh -
external/fastjet/plugins/Jade/fastjet/JadePlugin.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: JadePlugin.hh 3433 2014-07-23 08:17:03Z salam $5 // $Id: JadePlugin.hh 4061 2016-03-03 21:51:25Z salam $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 77 77 class JadePlugin : public JetDefinition::Plugin { 78 78 public: 79 /// enum that contains the two clustering strategy options; for 80 /// higher multiplicities, strategy_NNFJN2Plain is about a factor of 81 /// two faster. 82 enum Strategy { strategy_NNH = 0, strategy_NNFJN2Plain = 1}; 83 79 84 /// Main constructor for the Jade Plugin class. 80 JadePlugin ( ){}85 JadePlugin (Strategy strategy = strategy_NNFJN2Plain) : _strategy(strategy) {} 81 86 82 87 /// copy constructor … … 100 105 private: 101 106 107 template<class N> void _actual_run_clustering(ClusterSequence &) const; 108 109 Strategy _strategy; 102 110 }; 103 111 -
external/fastjet/plugins/SISCone/SISConePlugin.cc
rd091310 r1d208a2 78 78 // static members declaration // 79 79 ///////////////////////////////////////////// 80 std::auto_ptr<SISConePlugin> SISConePlugin::stored_plugin;81 std::auto_ptr<std::vector<PseudoJet> > SISConePlugin::stored_particles;82 std::auto_ptr<Csiscone> SISConePlugin::stored_siscone;80 SharedPtr<SISConePlugin> SISConePlugin::stored_plugin; 81 SharedPtr<std::vector<PseudoJet> > SISConePlugin::stored_particles; 82 SharedPtr<Csiscone> SISConePlugin::stored_siscone; 83 83 84 84 -
external/fastjet/plugins/SISCone/config.h
rd091310 r1d208a2 1 /* siscone/config.h. Generated from config.h.in by configure. */ 1 #ifndef _SISCONE_CONFIG_H 2 #define _SISCONE_CONFIG_H 1 3 4 /* siscone/config.h. Generated automatically at end of configure. */ 5 /* siscone/config_raw.h. Generated from config.h.in by configure. */ 2 6 /* config.h.in. Generated from configure.ac by autoheader. */ 3 7 4 8 /* Define to 1 if you have the <dlfcn.h> header file. */ 5 #define HAVE_DLFCN_H 1 9 #ifndef SISCONE_HAVE_DLFCN_H 10 #define SISCONE_HAVE_DLFCN_H 1 11 #endif 6 12 7 13 /* Define to 1 if you have the <inttypes.h> header file. */ 8 #define HAVE_INTTYPES_H 1 14 #ifndef SISCONE_HAVE_INTTYPES_H 15 #define SISCONE_HAVE_INTTYPES_H 1 16 #endif 9 17 10 18 /* Define to 1 if you have the `m' library (-lm). */ 11 #define HAVE_LIBM 1 19 #ifndef SISCONE_HAVE_LIBM 20 #define SISCONE_HAVE_LIBM 1 21 #endif 12 22 13 23 /* Define to 1 if you have the <memory.h> header file. */ 14 #define HAVE_MEMORY_H 1 24 #ifndef SISCONE_HAVE_MEMORY_H 25 #define SISCONE_HAVE_MEMORY_H 1 26 #endif 15 27 16 28 /* Define to 1 if you have the <stdint.h> header file. */ 17 #define HAVE_STDINT_H 1 29 #ifndef SISCONE_HAVE_STDINT_H 30 #define SISCONE_HAVE_STDINT_H 1 31 #endif 18 32 19 33 /* Define to 1 if you have the <stdlib.h> header file. */ 20 #define HAVE_STDLIB_H 1 34 #ifndef SISCONE_HAVE_STDLIB_H 35 #define SISCONE_HAVE_STDLIB_H 1 36 #endif 21 37 22 38 /* Define to 1 if you have the <strings.h> header file. */ 23 #define HAVE_STRINGS_H 1 39 #ifndef SISCONE_HAVE_STRINGS_H 40 #define SISCONE_HAVE_STRINGS_H 1 41 #endif 24 42 25 43 /* Define to 1 if you have the <string.h> header file. */ 26 #define HAVE_STRING_H 1 44 #ifndef SISCONE_HAVE_STRING_H 45 #define SISCONE_HAVE_STRING_H 1 46 #endif 27 47 28 48 /* Define to 1 if you have the <sys/stat.h> header file. */ 29 #define HAVE_SYS_STAT_H 1 49 #ifndef SISCONE_HAVE_SYS_STAT_H 50 #define SISCONE_HAVE_SYS_STAT_H 1 51 #endif 30 52 31 53 /* Define to 1 if you have the <sys/types.h> header file. */ 32 #define HAVE_SYS_TYPES_H 1 54 #ifndef SISCONE_HAVE_SYS_TYPES_H 55 #define SISCONE_HAVE_SYS_TYPES_H 1 56 #endif 33 57 34 58 /* Define to 1 if you have the <unistd.h> header file. */ 35 #define HAVE_UNISTD_H 1 59 #ifndef SISCONE_HAVE_UNISTD_H 60 #define SISCONE_HAVE_UNISTD_H 1 61 #endif 36 62 37 /* Define to the sub-directory in which libtool stores uninstalled libraries. 38 */ 39 #define LT_OBJDIR ".libs/" 63 /* Define to the sub-directory where libtool stores uninstalled libraries. */ 64 #ifndef SISCONE_LT_OBJDIR 65 #define SISCONE_LT_OBJDIR ".libs/" 66 #endif 40 67 41 68 /* Name of package */ 42 #define PACKAGE "siscone" 69 #ifndef SISCONE_PACKAGE 70 #define SISCONE_PACKAGE "siscone" 71 #endif 43 72 44 73 /* Define to the address where bug reports for this package should be sent. */ 45 #define PACKAGE_BUGREPORT "" 74 #ifndef SISCONE_PACKAGE_BUGREPORT 75 #define SISCONE_PACKAGE_BUGREPORT "" 76 #endif 46 77 47 78 /* Define to the full name of this package. */ 48 #define PACKAGE_NAME "SISCone" 79 #ifndef SISCONE_PACKAGE_NAME 80 #define SISCONE_PACKAGE_NAME "SISCone" 81 #endif 49 82 50 83 /* Define to the full name and version of this package. */ 51 #define PACKAGE_STRING "SISCone 3.0.0" 84 #ifndef SISCONE_PACKAGE_STRING 85 #define SISCONE_PACKAGE_STRING "SISCone 3.0.3" 86 #endif 52 87 53 88 /* Define to the one symbol short name of this package. */ 54 #define PACKAGE_TARNAME "siscone" 89 #ifndef SISCONE_PACKAGE_TARNAME 90 #define SISCONE_PACKAGE_TARNAME "siscone" 91 #endif 92 93 /* Define to the home page for this package. */ 94 #ifndef SISCONE_PACKAGE_URL 95 #define SISCONE_PACKAGE_URL "" 96 #endif 55 97 56 98 /* Define to the version of this package. */ 57 #define PACKAGE_VERSION "3.0.0" 99 #ifndef SISCONE_PACKAGE_VERSION 100 #define SISCONE_PACKAGE_VERSION "3.0.3" 101 #endif 58 102 59 103 /* Define to 1 if you have the ANSI C header files. */ 60 #define STDC_HEADERS 1 104 #ifndef SISCONE_STDC_HEADERS 105 #define SISCONE_STDC_HEADERS 1 106 #endif 107 108 /* use unique_ptr instead of auto_ptr */ 109 /* #undef USES_UNIQUE_PTR_AS_AUTO_PTR */ 61 110 62 111 /* Version number of package */ 63 #define VERSION "3.0.0" 112 #ifndef SISCONE_VERSION 113 #define SISCONE_VERSION "3.0.3" 114 #endif 115 116 /* once: _SISCONE_CONFIG_H */ 117 #endif -
external/fastjet/plugins/SISCone/defines.h
rd091310 r1d208a2 22 22 // Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA // 23 23 // // 24 // $Revision:: 225$//25 // $Date:: 20 08-05-20 16:59:47 +0200 (Tue, 20 May 2008) $//24 // $Revision:: 401 $// 25 // $Date:: 2016-05-19 16:44:37 +0200 (Thu, 19 May 2016) $// 26 26 /////////////////////////////////////////////////////////////////////////////// 27 27 … … 35 35 // defined in siscone.h 36 36 // Otherwise, config.h 37 // It is also defined as " PACKAGE_NAME" in config.h but this method37 // It is also defined as "SISCONE_PACKAGE_NAME" in config.h but this method 38 38 // might lead to conflicts 39 //#define PROGRAM PACKAGE_NAME39 //#define PROGRAM SISCONE_PACKAGE_NAME 40 40 41 41 // program version … … 43 43 // siscone::siscone_version 44 44 // defined in siscone.h 45 // It is also defined as " VERSION" in config.h but this method45 // It is also defined as "SISCONE_VERSION" in config.h but this method 46 46 // might lead to conflicts 47 47 -
external/fastjet/plugins/SISCone/fastjet/SISConePlugin.hh
rd091310 r1d208a2 191 191 // part needed for the cache 192 192 // variables for caching the results and the input 193 static std::auto_ptr<SISConePlugin > stored_plugin;194 static std::auto_ptr<std::vector<PseudoJet> > stored_particles;195 static std::auto_ptr<siscone::Csiscone > stored_siscone;193 static SharedPtr<SISConePlugin > stored_plugin; 194 static SharedPtr<std::vector<PseudoJet> > stored_particles; 195 static SharedPtr<siscone::Csiscone > stored_siscone; 196 196 }; 197 197 -
external/fastjet/plugins/SISCone/fastjet/SISConeSphericalPlugin.hh
rd091310 r1d208a2 166 166 // part needed for the cache 167 167 // variables for caching the results and the input 168 static std::auto_ptr<SISConeSphericalPlugin > stored_plugin;169 static std::auto_ptr<std::vector<PseudoJet> > stored_particles;170 static std::auto_ptr<siscone_spherical::CSphsiscone> stored_siscone;168 static SharedPtr<SISConeSphericalPlugin > stored_plugin; 169 static SharedPtr<std::vector<PseudoJet> > stored_particles; 170 static SharedPtr<siscone_spherical::CSphsiscone> stored_siscone; 171 171 }; 172 172 -
external/fastjet/plugins/SISCone/siscone.cc
rd091310 r1d208a2 21 21 // Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA // 22 22 // // 23 // $Revision:: 371$//24 // $Date:: 201 4-09-09 10:05:32 +0200 (Tue, 09 Sep 2014) $//23 // $Revision:: 403 $// 24 // $Date:: 2016-05-19 16:52:05 +0200 (Thu, 19 May 2016) $// 25 25 /////////////////////////////////////////////////////////////////////////////// 26 26 27 //#ifdef HAVE_CONFIG_H28 27 #include "config.h" 29 //#else30 //#define PACKAGE_NAME "SISCone"31 //#define VERSION "3.0.0"32 //#warning "No config.h file available, using preset values"33 //#endif34 35 28 #include "ranlux.h" 36 29 #include "momentum.h" … … 254 247 // print the banner 255 248 if (_banner_ostr != 0){ 249 ios::fmtflags flags_to_restore(_banner_ostr->flags()); 250 256 251 (*_banner_ostr) << "#ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo" << endl; 257 252 (*_banner_ostr) << "# SISCone version " << setw(28) << left << siscone_version() << "o" << endl; … … 269 264 270 265 _banner_ostr->flush(); 266 _banner_ostr->flags(flags_to_restore); 271 267 } 272 268 } … … 279 275 * return SISCone package name. 280 276 * This is nothing but "SISCone", it is a replacement to the 281 * PACKAGE_NAME string defined in config.h and which is not282 * public by default.277 * SISCONE_PACKAGE_NAME string defined in config.h and which is not 278 * guaranteed to be public. 283 279 * return the SISCone name as a string 284 280 */ 285 281 string siscone_package_name(){ 286 return PACKAGE_NAME;282 return SISCONE_PACKAGE_NAME; 287 283 } 288 284 … … 293 289 */ 294 290 string siscone_version(){ 295 return VERSION;296 } 297 298 } 291 return SISCONE_VERSION; 292 } 293 294 } -
external/fastjet/plugins/SISCone/siscone.h
rd091310 r1d208a2 22 22 // Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA // 23 23 // // 24 // $Revision:: 369$//25 // $Date:: 201 4-09-04 16:57:55 +0200 (Thu, 04 Sep 2014) $//24 // $Revision:: 401 $// 25 // $Date:: 2016-05-19 16:44:37 +0200 (Thu, 19 May 2016) $// 26 26 /////////////////////////////////////////////////////////////////////////////// 27 27 … … 160 160 * return SISCone package name. 161 161 * This is nothing but "SISCone", it is a replacement to the 162 * PACKAGE_NAME string defined in config.h and which is not163 * public by default.162 * SISCONE_PACKAGE_NAME string defined in config.h and which is not 163 * guaranteed to be public. 164 164 * \return the SISCone name as a string 165 165 */ -
external/fastjet/plugins/SISCone/split_merge.cc
rd091310 r1d208a2 21 21 // Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA // 22 22 // // 23 // $Revision:: 3 70 $//24 // $Date:: 201 4-09-04 17:03:15 +0200 (Thu, 04 Sep 2014) $//23 // $Revision:: 390 $// 24 // $Date:: 2016-03-03 11:06:52 +0100 (Thu, 03 Mar 2016) $// 25 25 /////////////////////////////////////////////////////////////////////////////// 26 26 … … 54 54 pt_tilde = 0.0; 55 55 sm_var2 = 0.0; 56 pass = CJET_INEXISTENT_PASS; // initialised to a value that should 57 // notappear in the end (after clustering) 56 58 } 57 59 … … 659 661 660 662 #ifdef DEBUG_SPLIT_MERGE 661 cout << "PR-Jet " << jets.size() << " [size " << next_jet.contents.size() << "]:";663 cout << "PR-Jet " << jets.size() << " [size " << jet.contents.size() << "]:"; 662 664 #endif 663 665 … … 1179 1181 } 1180 1182 1181 return 0.0;1182 } 1183 1184 } 1183 //return 0.0; 1184 } 1185 1186 } -
external/fastjet/plugins/SISCone/split_merge.h
rd091310 r1d208a2 22 22 // Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA // 23 23 // // 24 // $Revision:: 367$//25 // $Date:: 201 4-09-04 15:57:37 +0200 (Thu, 04 Sep 2014) $//24 // $Revision:: 405 $// 25 // $Date:: 2016-05-23 20:15:02 +0200 (Mon, 23 May 2016) $// 26 26 /////////////////////////////////////////////////////////////////////////////// 27 27 … … 29 29 #define __SPLIT_MERGE_H__ 30 30 31 #include "config.h" 31 32 #include "defines.h" 32 33 #include "geom_2d.h" … … 39 40 40 41 namespace siscone{ 42 43 const int CJET_INEXISTENT_PASS = -2; 41 44 42 45 /** … … 75 78 /// pass at which the jet has been found 76 79 /// It starts at 0 (first pass), -1 means infinite rapidity 80 /// (it will be initialised to "CJET_INEXISTENT_PASS" which should 81 /// never appear after clustering) 77 82 int pass; 78 83 }; … … 441 446 // jet information 442 447 /// list of jet candidates 448 #ifdef SISCONE_USES_UNIQUE_PTR_AS_AUTO_PTR 449 std::unique_ptr<std::multiset<Cjet,Csplit_merge_ptcomparison> > candidates; 450 #else 443 451 std::auto_ptr<std::multiset<Cjet,Csplit_merge_ptcomparison> > candidates; 444 452 #endif 453 445 454 /// minimal pt2 446 455 double pt_min2; -
external/fastjet/plugins/SISCone/vicinity.cc
rd091310 r1d208a2 21 21 // Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA // 22 22 // // 23 // $Revision:: 123$//24 // $Date:: 20 07-03-01 02:52:16 +0100 (Thu, 01 Mar 2007) $//23 // $Revision:: 388 $// 24 // $Date:: 2016-03-03 10:42:25 +0100 (Thu, 03 Mar 2016) $// 25 25 /////////////////////////////////////////////////////////////////////////////// 26 26 … … 80 80 VR2 = VR = 0.0; 81 81 82 ve_list = NULL; 82 83 set_particle_list(_particle_list); 83 84 } -
external/fastjet/tools/Filter.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: Filter.cc 3760 2014-12-19 10:05:10Z soyez $2 // $Id: Filter.cc 4080 2016-03-09 15:01:57Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 31 31 #include "fastjet/tools/Filter.hh" 32 32 #include "fastjet/tools/Recluster.hh" 33 #include "fastjet/tools/Subtractor.hh" 33 34 #include <fastjet/ClusterSequenceActiveAreaExplicitGhosts.hh> 34 35 #include <cassert> … … 98 99 } else if (_rho!=0){ 99 100 if (subjets.size()>0){ 100 const ClusterSequenceAreaBase *csab = subjets[0].validated_csab();101 //const ClusterSequenceAreaBase *csab = subjets[0].validated_csab(); 101 102 for (unsigned int i=0;i<subjets.size();i++){ 102 subjets[i]=csab->subtracted_jet(subjets[i], _rho); 103 //subjets[i]=csab->subtracted_jet(subjets[i], _rho); 104 subjets[i]=Subtractor(_rho)(subjets[i]); 103 105 } 104 106 } -
external/fastjet/tools/Filter.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: Filter.hh 384 5 2015-03-08 08:35:36Z soyez $5 // $Id: Filter.hh 3846 2015-03-08 08:35:43Z soyez $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 143 143 /// deciding which ones to keep. It takes precedence over a non-zero rho. 144 144 void set_subtractor(const FunctionOfPseudoJet<PseudoJet> * subtractor_in) {_subtractor = subtractor_in;} 145 146 /// Set a subtractor that is applied to all individual subjets before 147 /// deciding which ones to keep. It takes precedence over a non-zero rho. 148 const FunctionOfPseudoJet<PseudoJet> * subtractor() const{ return _subtractor;} 145 149 146 150 /// runs the filtering and sets kept and rejected to be the jets of interest -
external/fastjet/tools/GridMedianBackgroundEstimator.hh
rd091310 r1d208a2 3 3 4 4 //FJSTARTHEADER 5 // $Id: GridMedianBackgroundEstimator.hh 3 778 2014-12-24 09:28:09Z salam $5 // $Id: GridMedianBackgroundEstimator.hh 3969 2015-09-21 08:57:59Z salam $ 6 6 // 7 7 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 194 194 /// determination of rho_m. 195 195 /// 196 /// Note that support for sigma_m is automatic i sone has sigma and196 /// Note that support for sigma_m is automatic if one has sigma and 197 197 /// rho_m support. 198 198 bool has_rho_m() const {return _enable_rho_m;} -
external/fastjet/tools/JetMedianBackgroundEstimator.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: JetMedianBackgroundEstimator.cc 3517 2014-08-01 14:23:13Z soyez $2 // $Id: JetMedianBackgroundEstimator.cc 4047 2016-03-03 13:21:49Z soyez $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 194 194 195 195 _csi = jets[0].structure_shared_ptr(); 196 ClusterSequenceStructure * csi = dynamic_cast<ClusterSequenceStructure*>(_csi ());196 ClusterSequenceStructure * csi = dynamic_cast<ClusterSequenceStructure*>(_csi.get()); 197 197 const ClusterSequenceAreaBase * csab = csi->validated_csab(); 198 198 … … 467 467 468 468 // determine the number of empty jets 469 const ClusterSequenceAreaBase * csab = (dynamic_cast<ClusterSequenceStructure*>(_csi ()))->validated_csab();469 const ClusterSequenceAreaBase * csab = (dynamic_cast<ClusterSequenceStructure*>(_csi.get()))->validated_csab(); 470 470 if (csab->has_explicit_ghosts()) { 471 471 _empty_area = 0.0; … … 503 503 // throw an error otherwise 504 504 void JetMedianBackgroundEstimator::_check_csa_alive() const{ 505 ClusterSequenceStructure* csa = dynamic_cast<ClusterSequenceStructure*>(_csi ());505 ClusterSequenceStructure* csa = dynamic_cast<ClusterSequenceStructure*>(_csi.get()); 506 506 if (csa == 0) { 507 507 throw Error("JetMedianBackgroundEstimator: there is no cluster sequence associated with the JetMedianBackgroundEstimator"); 508 508 } 509 if (! dynamic_cast<ClusterSequenceStructure*>(_csi ())->has_associated_cluster_sequence())509 if (! dynamic_cast<ClusterSequenceStructure*>(_csi.get())->has_associated_cluster_sequence()) 510 510 throw Error("JetMedianBackgroundEstimator: modifications are no longer possible as the underlying ClusterSequence has gone out of scope"); 511 511 } … … 521 521 // cluster sequence 522 522 if (_jet_def.jet_algorithm() == undefined_jet_algorithm){ 523 const ClusterSequence * cs = dynamic_cast<ClusterSequenceStructure*>(_csi ())->validated_cs();523 const ClusterSequence * cs = dynamic_cast<ClusterSequenceStructure*>(_csi.get())->validated_cs(); 524 524 jet_def = &(cs->jet_def()); 525 525 } -
external/fastjet/tools/Recluster.hh
rd091310 r1d208a2 2 2 #define __FASTJET_TOOLS_RECLUSTER_HH__ 3 3 4 // $Id: Recluster.hh 37 60 2014-12-19 10:05:10Z soyez$4 // $Id: Recluster.hh 3753 2014-12-17 15:19:55Z salam $ 5 5 // 6 6 // Copyright (c) 2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez -
external/fastjet/tools/Subtractor.cc
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: Subtractor.cc 3 670 2014-09-08 14:17:59Z soyez$2 // $Id: Subtractor.cc 3970 2015-09-21 10:31:17Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 39 39 const double Subtractor::_invalid_rho = -numeric_limits<double>::infinity(); 40 40 41 LimitedWarning Subtractor::_unused_rho_m_warning; 41 42 42 43 //---------------------------------------------------------------------- -
external/fastjet/tools/Subtractor.hh
rd091310 r1d208a2 1 1 //FJSTARTHEADER 2 // $Id: Subtractor.hh 3 670 2014-09-08 14:17:59Z soyez$2 // $Id: Subtractor.hh 3970 2015-09-21 10:31:17Z salam $ 3 3 // 4 4 // Copyright (c) 2005-2014, Matteo Cacciari, Gavin P. Salam and Gregory Soyez … … 203 203 static const double _invalid_rho; 204 204 205 mutableLimitedWarning _unused_rho_m_warning;205 static LimitedWarning _unused_rho_m_warning; 206 206 }; 207 207
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