| 1 | /*
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| 2 | Example of using vertex fitter class to fit primary vertex
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| 3 | assumed to be generated with Pythia8/ee_zh_smr-shf.cmn
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| 4 | */
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| 5 |
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| 6 | #ifdef __CLING__
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| 7 | R__LOAD_LIBRARY(libDelphes)
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| 8 |
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| 9 | #include "classes/DelphesClasses.h"
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| 10 | #include "external/ExRootAnalysis/ExRootTreeReader.h"
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| 11 | #include "modules/TrackCovariance.h"
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| 12 | #include "external/TrackCovariance/TrkUtil.h"
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| 13 | #include "external/TrackCovariance/VertexFit.h"
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| 14 |
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| 15 | #endif
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| 16 |
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| 17 |
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| 18 | //------------------------------------------------------------------------------
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| 19 |
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| 20 | void ExamplePVtxFind(const char* inputFile, Int_t Nevent = 5)
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| 21 | {
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| 22 | // Create chain of root trees
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| 23 | TChain chain("Delphes");
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| 24 | chain.Add(inputFile);
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| 25 |
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| 26 | // Create object of class ExRootTreeReader
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| 27 | ExRootTreeReader* treeReader = new ExRootTreeReader(&chain);
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| 28 | Long64_t numberOfEntries = treeReader->GetEntries();
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| 29 |
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| 30 | // Get pointers to branches used in this analysis
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| 31 | TClonesArray* branchGenPart = treeReader->UseBranch("Particle");
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| 32 | TClonesArray* branchTrack = treeReader->UseBranch("Track");
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| 33 |
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| 34 | // Book histograms
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| 35 | // Vertex fit pulls
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| 36 | Int_t Nbin = 100;
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| 37 | TH1D* hXpull = new TH1D("hXpull", "Pull X vertex component", Nbin, -10., 10.);
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| 38 | TH1D* hYpull = new TH1D("hYpull", "Pull Y vertex component", Nbin, -10., 10.);
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| 39 | TH1D* hZpull = new TH1D("hZpull", "Pull Z vertex component", Nbin, -10., 10.);
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| 40 | TH1D* hChi2 = new TH1D("hChi2", "Vertex #chi^{2}/N_{dof}", Nbin, 0., 10.);
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| 41 | // Track vertex associations
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| 42 | TH1D* hTrPrim = new TH1D("hTrPrim", "Available primary tracks", 41, -0.5, 40.5);
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| 43 | TH1D* hTrFound = new TH1D("hTrFound", "Found primary tracks", 41, -0.5, 40.5);
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| 44 | TH1D* hTrFoundG = new TH1D("hTrFoundG", "Found GOOD primary tracks", 41, -0.5, 40.5);
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| 45 | TH1D* hTrFoundB = new TH1D("hTrFoundB", "Found BAD primary tracks", 41, -0.5, 40.5);
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| 46 | TH1D* hTrDiff = new TH1D("hTrDiff", "Found - available tracks", 21, -10.5, 10.5);
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| 47 | //
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| 48 | // Loop over all events
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| 49 | Int_t Nev = TMath::Min(Nevent, (Int_t)numberOfEntries);
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| 50 | for (Int_t entry = 0; entry < Nev; ++entry)
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| 51 | {
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| 52 | // Load selected branches with data from specified event
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| 53 | treeReader->ReadEntry(entry);
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| 54 | Int_t NtrG = branchTrack->GetEntries();
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| 55 | if(entry%500 ==0)std::cout << "Event "<<entry<<" opened containing " << NtrG << " tracks" << std::endl;
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| 56 | TVectorD** pr = new TVectorD * [NtrG];
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| 57 | TMatrixDSym** cv = new TMatrixDSym * [NtrG];
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| 58 | //
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| 59 | // test Particle branch
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| 60 | Int_t Ngen = branchGenPart->GetEntries();
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| 61 | //std::cout << "Nr. of generated particles: " << Ngen << std::endl;
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| 62 | // If event contains at least 1 track
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| 63 | //
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| 64 | Double_t Nprim = 0.0;
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| 65 | Double_t xpv = 0.0; // Init true primary vertex position
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| 66 | Double_t ypv = 0.0;
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| 67 | Double_t zpv = 0.0;
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| 68 | if (branchTrack->GetEntries() > 0)
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| 69 | {
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| 70 | // Loop on tracks
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| 71 | for (Int_t it = 0; it < branchTrack->GetEntries(); it++)
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| 72 | {
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| 73 | Track* trk = (Track*)branchTrack->At(it);
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| 74 | //
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| 75 | // Start fitting all available tracks
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| 76 | //
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| 77 | // Reconstructed track parameters
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| 78 | Double_t obsD0 = trk->D0;
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| 79 | Double_t obsPhi = trk->Phi;
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| 80 | Double_t obsC = trk->C;
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| 81 | Double_t obsZ0 = trk->DZ;
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| 82 | Double_t obsCtg = trk->CtgTheta;
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| 83 | //std::cout << "Got track parameters for track " << it << std::endl;
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| 84 | //
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| 85 | // Load all tracks for vertex fit
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| 86 | Double_t oPar[5] = { obsD0, obsPhi, obsC, obsZ0, obsCtg };
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| 87 | TVectorD obsPar(5, oPar); // Fill observed parameters
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| 88 | pr[it] = new TVectorD(obsPar);
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| 89 | cv[it] = new TMatrixDSym(trk->CovarianceMatrix());
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| 90 | // Check covariance
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| 91 | /*
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| 92 | TMatrixDSymEigen Eign(*cv[it]);
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| 93 | TVectorD lambda = Eign.GetEigenValues();
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| 94 | Bool_t good = kTRUE;
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| 95 | for(Int_t i=0; i<5; i++) if(lambda(i)<0.0) good = kFALSE;
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| 96 | if(!good){
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| 97 | std::cout<<"Cov["<<it<<"]"<<" eigenvalues: "
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| 98 | <<lambda(0)<<", "<<lambda(1)<<", "<<lambda(2)<<", "
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| 99 | <<lambda(3)<<", "<<lambda(4)<<std::endl;
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| 100 | TMatrixDSym Ctmp = *cv[it];
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| 101 | std::cout<<"Error D (dir - cov) "<<trk->ErrorD0
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| 102 | <<" - "<<TMath::Sqrt(Ctmp(0,0))<<std::endl;
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| 103 | }
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| 104 | */
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| 105 | //std::cout << "Track loaded it= " << it << std::endl;
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| 106 | //
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| 107 | // Find true primary vertex
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| 108 | GenParticle* gp = (GenParticle*)trk->Particle.GetObject();
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| 109 | //std::cout << "GenParticle pointer "<<gp << std::endl;
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| 110 | //
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| 111 | // Position of origin in mm
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| 112 | Double_t x = gp->X;
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| 113 | Double_t y = gp->Y;
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| 114 | Double_t z = gp->Z;
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| 115 | Bool_t prim = kTRUE; // Is primary?
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| 116 | Int_t mp = gp->M1; // Mother
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| 117 | while (mp > 0) {
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| 118 | GenParticle* gm =
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| 119 | (GenParticle*)branchGenPart->At(mp);
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| 120 | Double_t xm = gm->X;
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| 121 | Double_t ym = gm->Y;
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| 122 | Double_t zm = gm->Z;
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| 123 | if (x != xm || y != ym || z != zm) {
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| 124 | prim = kFALSE;
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| 125 | break;
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| 126 | }
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| 127 | else mp = gm->M1;
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| 128 | }
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| 129 | if (prim) { // It's a primary track
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| 130 | Nprim++;
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| 131 | xpv = x; // Store true primary
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| 132 | ypv = y;
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| 133 | zpv = z;
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| 134 | }
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| 135 |
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| 136 | } // End loop on tracks
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| 137 | }
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| 138 | std::cout<<"PVtxFind true vertex: Nprim= "<<Nprim<<", x,y,z= "<<xpv<<", "<<ypv<<", "<<zpv<<std::endl;
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| 139 | //
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| 140 | // Find primary vertex
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| 141 | //
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| 142 | //Beam constraint
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| 143 | TVectorD xpvc(3);
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| 144 | xpvc(0) = 1.0;
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| 145 | xpvc(1) = -2.0;
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| 146 | xpvc(2) = 10.0;
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| 147 | TMatrixDSym covpvc(3); covpvc.Zero();
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| 148 | covpvc(0, 0) = 0.0097 * 0.0097;
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| 149 | covpvc(1, 1) = 2.55e-05 * 2.55e-05;
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| 150 | covpvc(2, 2) = 0.64 * 0.64;
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| 151 | if(Nprim == 0){
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| 152 | xpv = xpvc(0);
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| 153 | ypv = xpvc(1);
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| 154 | zpv = xpvc(2);
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| 155 | }
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| 156 | //
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| 157 | //
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| 158 | // Skim tracks
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| 159 | Int_t nSkim = 0;
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| 160 | Int_t* nSkimmed = new Int_t[NtrG];
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| 161 | TVectorD** PrSk = new TVectorD * [1];
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| 162 | TMatrixDSym** CvSk = new TMatrixDSym * [1];
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| 163 | Double_t MaxChi2 = 2.0+3*2.;
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| 164 | for (Int_t n = 0; n < NtrG; n++) {
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| 165 | PrSk[0] = new TVectorD(*pr[n]);
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| 166 | CvSk[0] = new TMatrixDSym(*cv[n]);
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| 167 | VertexFit* Vskim = new VertexFit(1,PrSk, CvSk);
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| 168 | Vskim->AddVtxConstraint(xpvc, covpvc);
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| 169 | Double_t Chi2One = Vskim->GetVtxChi2();
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| 170 | //std::cout<<"Track "<<n<<", Chi2 = "<<Chi2One<<std::endl;
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| 171 | if (Chi2One < MaxChi2) {
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| 172 | nSkimmed[nSkim] = n;
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| 173 | //std::cout << "nSkimmed[" << nSkim << "] = " << n << std::endl;
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| 174 | nSkim++;
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| 175 | }
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| 176 | // Cleanup
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| 177 | delete Vskim;
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| 178 | }
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| 179 | delete PrSk[0];
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| 180 | delete CvSk[0];
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| 181 | delete[] PrSk;
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| 182 | delete[] CvSk;
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| 183 | //
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| 184 | // Load tracks for primary fit
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| 185 | Int_t MinTrk = 1; // Minumum # tracks for vertex fit
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| 186 | if (nSkim >= MinTrk) {
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| 187 | TVectorD** PrFit = new TVectorD * [nSkim];
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| 188 | TMatrixDSym** CvFit = new TMatrixDSym * [nSkim];
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| 189 | for (Int_t n = 0; n < nSkim; n++) {
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| 190 | PrFit[n] = new TVectorD(*pr[nSkimmed[n]]);
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| 191 | CvFit[n] = new TMatrixDSym(*cv[nSkimmed[n]]);
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| 192 | }
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| 193 | delete[] nSkimmed;
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| 194 | Int_t Nfound = nSkim;
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| 195 | if(entry%500 ==0)std::cout << "Found tracks "<<Nfound << std::endl;
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| 196 | const Int_t MaxFound = 100; Double_t Chi2LL[MaxFound]; Double_t *Chi2L = Chi2LL;
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| 197 | VertexFit* Vtx = new VertexFit(nSkim, PrFit, CvFit);
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| 198 | //std::cout << "Vertex fit created " << std::endl;
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| 199 | Vtx->AddVtxConstraint(xpvc, covpvc);
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| 200 | //
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| 201 | // Remove tracks with large chi2
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| 202 | Double_t MaxChi2Fit = 4.5;
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| 203 | Bool_t Done = kFALSE;
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| 204 | while (!Done) {
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| 205 | //std::cout << "After while " << std::endl;
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| 206 | // Find largest Chi2 contribution
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| 207 | TVectorD Chi2List = Vtx->GetVtxChi2List(); // Get contributions to Chi2
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| 208 | //std::cout << "After Chi2List. " << std::endl; Chi2List.Print();
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| 209 | //Double_t* Chi2L = new Double_t[Nfound];
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| 210 | Chi2L = Chi2List.GetMatrixArray();
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| 211 | Int_t iMax = TMath::LocMax(Nfound, Chi2L);
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| 212 | //std::cout << "iMax = "<<iMax << std::endl;
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| 213 | Double_t Chi2Mx = Chi2L[iMax];
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| 214 | //std::cout << "Chi2Mx "<<Chi2Mx << std::endl;
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| 215 | if (Chi2Mx > MaxChi2Fit && Nfound > 1) {
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| 216 | //std::cout << "Before remove. Nfound = "<<Nfound << std::endl;
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| 217 | Vtx->RemoveTrk(iMax);
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| 218 | //std::cout << "After remove." << std::endl;
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| 219 | Nfound--;
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| 220 | }
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| 221 | else {
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| 222 | Done = kTRUE;
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| 223 | }
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| 224 | }
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| 225 | //
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| 226 | //std::cout << "Before getting vertex " << std::endl;
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| 227 | //
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| 228 | // Require minimum number of tracks in vertex
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| 229 | Int_t Nmin = 1;
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| 230 | if (Nfound >= Nmin) {
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| 231 | TVectorD xvtx = Vtx->GetVtx();
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| 232 | std::cout << "Found vertex " << xvtx(0)<<", "<<xvtx(1)<<", "<<xvtx(2) << std::endl;
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| 233 | TMatrixDSym covX = Vtx->GetVtxCov();
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| 234 | Double_t Chi2 = Vtx->GetVtxChi2();
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| 235 | Double_t Ndof = 2 * (Double_t)Nfound;
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| 236 | Double_t PullX = (xvtx(0) - xpv) / TMath::Sqrt(covX(0, 0));
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| 237 | Double_t PullY = (xvtx(1) - ypv) / TMath::Sqrt(covX(1, 1));
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| 238 | Double_t PullZ = (xvtx(2) - zpv) / TMath::Sqrt(covX(2, 2));
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| 239 | //
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| 240 | // Fill histograms
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| 241 | hXpull->Fill(PullX);
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| 242 | hYpull->Fill(PullY);
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| 243 | hZpull->Fill(PullZ);
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| 244 | hChi2->Fill(Chi2 / Ndof);
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| 245 | //
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| 246 | hTrPrim->Fill(Nprim);
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| 247 | hTrFound->Fill((Double_t)Nfound);
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| 248 | hTrDiff->Fill((Double_t)Nfound-Nprim);
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| 249 | //std::cout << "Histograms filled " << std::endl;
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| 250 | }
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| 251 | //
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| 252 | // Clean
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| 253 | delete Vtx;
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| 254 | for (Int_t i = 0; i < nSkim; i++) delete PrFit[i];
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| 255 | for (Int_t i = 0; i < nSkim; i++) delete CvFit[i];
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| 256 | delete[] PrFit;
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| 257 | delete[] CvFit;
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| 258 | }
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| 259 |
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| 260 | //std::cout << "Vertex chi2/Ndof = " << Chi2 / Ndof << std::endl;
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| 261 | //
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| 262 | // Cleanup
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| 263 | for (Int_t i = 0; i < NtrG; i++) delete pr[i];
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| 264 | for (Int_t i = 0; i < NtrG; i++) delete cv[i];
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| 265 | delete[] pr;
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| 266 | delete[] cv;
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| 267 | }
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| 268 | //
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| 269 | // Show resulting histograms
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| 270 | //
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| 271 | TCanvas* Cnv = new TCanvas("Cnv", "Delphes primary vertex pulls", 50, 50, 900, 500);
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| 272 | Cnv->Divide(2, 2);
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| 273 | Cnv->cd(1); gPad->SetLogy(1); gStyle->SetOptFit(1111);
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| 274 | hXpull->Fit("gaus"); hXpull->Draw();
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| 275 | Cnv->cd(2); gPad->SetLogy(1); gStyle->SetOptFit(1111);
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| 276 | hYpull->Fit("gaus"); hYpull->Draw();
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| 277 | Cnv->cd(3); gPad->SetLogy(1); gStyle->SetOptFit(1111);
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| 278 | hZpull->Fit("gaus"); hZpull->Draw();
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| 279 | Cnv->cd(4); hChi2->Draw();
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| 280 | //
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| 281 | TCanvas* CnvN = new TCanvas("CnvN", "Primary tracks found", 100, 100, 900, 500);
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| 282 | CnvN->Divide(2, 2);
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| 283 | CnvN->cd(1);
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| 284 | hTrPrim->Draw();
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| 285 | CnvN->cd(2);
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| 286 | hTrFound->SetLineColor(kRed);
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| 287 | hTrFound->Draw();
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| 288 | CnvN->cd(3);
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| 289 | hTrDiff->Draw();
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| 290 | }
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